PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G143700.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 392aa    MW: 42976.4 Da    PI: 9.8683
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G143700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.83.3e-31320377359
                        -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                        D ++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeHnh+
  Aqcoe5G143700.1.p 320 DDFSWRKYGQKPIKGSPHPRGYYKCSSLrGCPARKHVERALDDPTMLIVTYEGEHNHS 377
                        99************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105335.8E-17271316IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.0E-32308377IPR003657WRKY domain
PROSITE profilePS5081130.067313379IPR003657WRKY domain
SuperFamilySSF1182901.2E-26315377IPR003657WRKY domain
SMARTSM007741.1E-37318378IPR003657WRKY domain
PfamPF031061.0E-26320376IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    Send to blast
MAVELMMGFR NIDNGFSSSS SSSLKNNIIE ENNAVVEEAA SAGLESVEKL IGLLSQRQVQ  60
YQQASVEKNS KVAMEIEMDC KVVTDLAVNK FKKVISLLGR TRTGHARFRR GPSPISSPPT  120
SQPQSFQQQQ QQQQAPFPQQ IQLSHHEVIE SVKEEKQQCS GSRIYCPTPI QRLPPLPHHH  180
QYNNQHPSHQ SNSNGNQSFG VVKNGVLERK ESSKTITFAS SPQISASNSF MSSLTGDTDS  240
KQPSSSSAFQ ITNLSQISSS SGRPPLCSSM KRKCSSLDEG GAKCGGGTGR CHCSKRRKSR  300
VKKVVRIPAI SLKMADIPPD DFSWRKYGQK PIKGSPHPRG YYKCSSLRGC PARKHVERAL  360
DDPTMLIVTY EGEHNHSHSV TDTAGIILES S*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-20306376271WRKY transcription factor 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00450DAPTransfer from AT4G24240Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026445963.11e-154probable WRKY transcription factor 7
TrEMBLA0A2G5ELH70.0A0A2G5ELH7_AQUCA; Uncharacterized protein
STRINGAquca_007_00730.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.12e-75WRKY DNA-binding protein 7