PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G147500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 309aa    MW: 33309.6 Da    PI: 9.3484
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G147500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.64.6e-1399142855
                        HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         Er RR+r+++ f++L  llP++     +K +K++i+ +Av YIk Lq
  Aqcoe5G147500.1.p  99 TERERRKRMRNMFSNLHALLPQL----PPKADKSTIVDEAVSYIKTLQ 142
                        6*********************6....39******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.67591141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.27E-1591156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.5E-1496153IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.20E-1396146No hitNo description
SMARTSM003532.2E-899147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.1E-1099142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MSDELGQGNS LLETNSFAVS NSDNSGGSDD KKGKKPLISS SNSPTPTTTP TPATTPSTPA  60
GGPKRGRNGI AKNKKGGGGD GEGGEGGGQS DHDDVHIWTE RERRKRMRNM FSNLHALLPQ  120
LPPKADKSTI VDEAVSYIKT LQNTLKNLQK QKLERLRRAG TIGFEPTVVA PNMLTYNSSS  180
REAYLADQVS SMNLGMTASS GNSLPVVPSF PICFGTWSSP NVVLSVFGED AHISVCVPKK  240
LGFFTTIAYV LEKHRIDVVT AQLSSNNFRN VYMIHAHASG VSEHFRQVLP VEEIFKLAVG  300
EIMFWMST*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023922279.11e-105transcription factor bHLH95
TrEMBLA0A2G5ELA30.0A0A2G5ELA3_AQUCA; Uncharacterized protein
STRINGAquca_007_00701.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.14e-51bHLH family protein