PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G154600.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family B3
Protein Properties Length: 458aa    MW: 51558.6 Da    PI: 7.5219
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G154600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.44.6e-17103192198
                        EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                        f+kv++ps+v+   ++ +p kf+++h  + +e++++tl de+ +++  ++    ++ +  l++GWk+F  a++L egD++vF+l+++++f  
  Aqcoe5G154600.1.p 103 FVKVMLPSHVSGGFWMGFPAKFCSSHL-P-KEDVMMTLVDENQEEFLARF--LPRKTG--LSSGWKGFSIAHKLVEGDVLVFHLIKDTKF-- 186
                        89***********************95.3.3789****************..555544..*************************98888.. PP

                        EEEEE- CS
                 B3  93 vvkvfr 98 
                         v ++r
  Aqcoe5G154600.1.p 187 QVYILR 192
                        888877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.102.9E-2196193IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.34E-2596193IPR015300DNA-binding pseudobarrel domain
CDDcd100174.65E-27101192No hitNo description
PROSITE profilePS5086311.42103194IPR003340B3 DNA binding domain
SMARTSM010195.6E-20103194IPR003340B3 DNA binding domain
PfamPF023627.5E-16103192IPR003340B3 DNA binding domain
PfamPF052664.8E-8331442IPR007930Protein of unknown function DUF724
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MAVIEISAEE FGMQTSAAEE KKKKTSYEED VLALAQFSYF RNYYNPTSSP KPISMEGFHQ  60
VKIDTSLSYK QKHTLPDHDK ANQSAKERAE EVQANLDPEF PSFVKVMLPS HVSGGFWMGF  120
PAKFCSSHLP KEDVMMTLVD ENQEEFLARF LPRKTGLSSG WKGFSIAHKL VEGDVLVFHL  180
IKDTKFQVYI LRAYGLGGID GVVGLLSLDS HPKCTRQNNA GQRVMTTEET AIKCQKTSLM  240
AAAFPPSEEE ETESSSAEVG SEGLEGIMFS KMDEVQPHTP CKETNSTGVR RSSRVSTKTK  300
VWFDYMGLKR YSTKKKSYKQ HTTERVEQFQ SNGESRLKLA DGSMCDFVRV ADCIKASNLK  360
TSRDDFMAWD NSLEALEKRG LNVGFLRARV QQCMEIKAEA ATDLKMCGEL RVEQARLKAE  420
LAELERKSKT LDSNLKIYEA KSKVNEDRFR SVVNSPW*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5EKY80.0A0A2G5EKY8_AQUCA; Uncharacterized protein
STRINGAquca_007_00625.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.11e-44B3 family protein