PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe5G167400.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

MYB_related

Protein Properties

Length: 619aa MW: 65701.6 Da PI: 6.9516

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe5G167400.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.2	9e-09	212	256	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrw 44 r+ WT++Ed l+ av++ G ++W+ I + Rt+ q+ rw Aqcoe5G167400.1.p 212 RKQWTEQEDMELIAAVRKCGERNWSNILKGEFkGDRTASQLSQRW 256 789************************986545699999999998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	16.88	207	264	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	7.9E-13	208	262	IPR009057	Homeodomain-like
SuperFamily	SSF46689	2.55E-11	210	261	IPR009057	Homeodomain-like
SMART	SM00717	8.3E-8	211	262	IPR001005	SANT/Myb domain
Pfam	PF00249	2.4E-7	212	256	IPR001005	SANT/Myb domain
CDD	cd11660	2.52E-12	213	261	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 619 aa Download sequence Send to blast
MAETKKKNKK KKVTISEEDM TLLLKRYSAT VIVKLLQEVA QVPDVKFDWN EVVKKTSTGI 60 TSAREYQMLW RHLAYRDTLL ENVDERMEPL DDDSDLETDL ESFPPVSAEA SGEAAAFAKV 120 LIGSRLPSNP GPPNRPTVEG PLTINIPIGQ SSPVASDNPQ PADTIDKNII VPVVVPKEKD 180 GGGPKACPAK GKKREDEDKD PNGATGTNKR KRKQWTEQED MELIAAVRKC GERNWSNILK 240 GEFKGDRTAS QLSQRWAILR KKQAHLGGAG PNSQLTEAQL ATRRAVSHAL NMPMVDNLMA 300 ACSVGATQSS IPSSSAEVPC GPEDMAGAQT QQASRNKGIS TPTSKPKGTA AKGPTVPFKS 360 HSGSDPMIQA AAVAAGARIA TPSTAASLLK AAQSKNVVHF RPGGCSMIKT SLPGATKPSP 420 TNHVGSRPKV HYIRTGLAPA SAPPTYSSPG PSIPHPGGSQ QEHGNSTKRQ IVTGSLPLST 480 ASSIVVLPSS SSTALCGAEE TKMAEDTKSE EIKEDGSGSA SKEFDDGQVD PKSGTFTENH 540 ATTVENLKSE TFTENHATTV ENLKSETFTE NHATTVGNLK QLTIVDAGEN KQLDDASKQA 600 ESSDAVKTEA CTTAMDED*

Sequence ? help Back to Top

Protein Sequence Length: 619 aa Download sequence Send to blast

MAETKKKNKK KKVTISEEDM TLLLKRYSAT VIVKLLQEVA QVPDVKFDWN EVVKKTSTGI  60
TSAREYQMLW RHLAYRDTLL ENVDERMEPL DDDSDLETDL ESFPPVSAEA SGEAAAFAKV  120
LIGSRLPSNP GPPNRPTVEG PLTINIPIGQ SSPVASDNPQ PADTIDKNII VPVVVPKEKD  180
GGGPKACPAK GKKREDEDKD PNGATGTNKR KRKQWTEQED MELIAAVRKC GERNWSNILK  240
GEFKGDRTAS QLSQRWAILR KKQAHLGGAG PNSQLTEAQL ATRRAVSHAL NMPMVDNLMA  300
ACSVGATQSS IPSSSAEVPC GPEDMAGAQT QQASRNKGIS TPTSKPKGTA AKGPTVPFKS  360
HSGSDPMIQA AAVAAGARIA TPSTAASLLK AAQSKNVVHF RPGGCSMIKT SLPGATKPSP  420
TNHVGSRPKV HYIRTGLAPA SAPPTYSSPG PSIPHPGGSQ QEHGNSTKRQ IVTGSLPLST  480
ASSIVVLPSS SSTALCGAEE TKMAEDTKSE EIKEDGSGSA SKEFDDGQVD PKSGTFTENH  540
ATTVENLKSE TFTENHATTV ENLKSETFTE NHATTVGNLK QLTIVDAGEN KQLDDASKQA  600
ESSDAVKTEA CTTAMDED*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	191	212	KKREDEDKDPNGATGTNKRKRK

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010277512.1	1e-150	PREDICTED: chitinase-like protein PB1E7.04c
TrEMBL	A0A2G5EKE2	0.0	A0A2G5EKE2_AQUCA; Uncharacterized protein
STRING	Aquca_007_00504.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	2e-53	MYB_related family protein

Link Out ? help Back to Top
Phytozome	Aqcoe5G167400.1.p