PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G197500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bZIP
Protein Properties Length: 388aa    MW: 41373.5 Da    PI: 5.0477
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G197500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1711.8e-22278340163
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        e+elkr+rrk +NRe+ArrsR+RK+ae+eeL+ kv++L+ eN+ L+kele+l +e +kl++e+
  Aqcoe5G197500.1.p 278 ERELKRQRRKLSNRESARRSRLRKQAECEELQVKVDTLTDENDNLRKELERLAEERQKLTNEN 340
                        89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077777.8E-27192IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165969.0E-12113243No hitNo description
Gene3DG3DSA:1.20.5.1703.0E-17273337No hitNo description
SMARTSM003382.6E-21278342IPR004827Basic-leucine zipper domain
PfamPF001706.4E-20278340IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.633280343IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.31E-11281337No hitNo description
CDDcd147025.65E-23283332No hitNo description
PROSITE patternPS000360285300IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0010629Biological Processnegative regulation of gene expression
GO:0090342Biological Processregulation of cell aging
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    Send to blast
MGSAEESTPA KPSRPSASSQ ETPPTPLYPD WSTPMQAYYG AGATQPPFFP TNVASPPPYP  60
YMWGGQMVSP YGTPIPYPAI YPHGGLYPHP NLATAQGAAM PTTQMEENNS PVKKIMSSGN  120
IGVVGGKLKE SGKAASGSRN DGVSRSAESG SEGSSDASDE FNHKDDSENK NKSFDQMLAD  180
GANAQNTSAH HSSAAVGSSL NGNGEPSANF PVPLPGNPVG DIAATNLNIG MDLWNASPVG  240
SVPLRARSNA SGVVPAVAPV KRDGHEGIVP EHLWGQDERE LKRQRRKLSN RESARRSRLR  300
KQAECEELQV KVDTLTDEND NLRKELERLA EERQKLTNEN ASLESELSQL YGEEAISTLK  360
GKNANMSVQS VNGFEQDTLM GNNSLSE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1280287LKRQRRKL
2294300RRSRLRK
3294301RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00039PBMTransfer from AT4G36730Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010244323.11e-150PREDICTED: G-box-binding factor 1-like isoform X2
TrEMBLA0A2G5EIR30.0A0A2G5EIR3_AQUCA; Uncharacterized protein
STRINGAquca_007_00161.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.12e-70G-box binding factor 1