PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G198200.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 196aa    MW: 22181.2 Da    PI: 4.7306
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G198200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM80.73.2e-25221482128
                NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                        ++G+ F P+  e+v++yL++kv g+++++ e+++++d+y+++  ++p+   v+++ +e yfF+ ++k+y  ++++  +t+ gyWk t ++ +
  Aqcoe5G198200.1.p  22 AKGIIFVPKVMEVVKDYLENKVYGRDMPC-EIVQQIDLYRYNADQIPMsgFVYGKANEAYFFTDNHKRYLMDNQTICQTSGGYWKVTDRNIQ 112
                        6899*************************.89***************4456777889***************9*999*************** PP

                NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        +++ k++ +  kktLvfy g++ +++ ++ v+++yrl
  Aqcoe5G198200.1.p 113 IID-KNSIIAYKKTLVFYWGTTLNSQMSNYVVEDYRL 148
                        ***.8889***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-2619175IPR003441NAC domain
PROSITE profilePS5100526.47421175IPR003441NAC domain
PfamPF023655.7E-1223148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MSGVPPGDLL VVPTKGGDVF LAKGIIFVPK VMEVVKDYLE NKVYGRDMPC EIVQQIDLYR  60
YNADQIPMSG FVYGKANEAY FFTDNHKRYL MDNQTICQTS GGYWKVTDRN IQIIDKNSII  120
AYKKTLVFYW GTTLNSQMSN YVVEDYRLNP EVSITNDINI RKNIENLALC KVELKDPGYS  180
TEESTVEEAN ISQSG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-162114815140Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5EIS61e-142A0A2G5EIS6_AQUCA; Uncharacterized protein
STRINGAquca_007_00155.11e-143(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46590.12e-23NAC domain containing protein 96