PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G208700.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ZF-HD
Protein Properties Length: 197aa    MW: 22430.3 Da    PI: 8.5703
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G208700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer74.12e-23961257
        ZF-HD_dimer  2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                       ++v+YkeC+kNh +slG++  DGC  fmp++   ++ ++l C ACgCHR+FHR e+
  Aqcoe5G208700.1.p  9 TTVTYKECQKNHTISLGSYIKDGCLAFMPNH---AKENGLFCHACGCHRSFHREEK 61
                       5799*************************94...4569***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257741.0E-101060IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047707.7E-201161IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015668.8E-191260IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152319.0541360IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Gene3DG3DSA:1.10.10.606.2E-4122188IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MEMGSGSSTT VTYKECQKNH TISLGSYIKD GCLAFMPNHA KENGLFCHAC GCHRSFHREE  60
KLKIISEDDA ENVLPVNFDA RRCDQGSVKK ELSSNTDANL EDVIDISDDE QVDRVITPES  120
VSKRTMSTTK AKKRRFREEE VRKLNTVCEL LDYKSPGKYG KGADRVKRLC QEIGISRDSF  180
RHYLNRRREF RGTSRI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5EIB01e-143A0A2G5EIB0_AQUCA; Uncharacterized protein
STRINGAquca_007_00062.11e-144(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.12e-15mini zinc finger 2