PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G223400.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 525aa    MW: 57970.5 Da    PI: 7.1321
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G223400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY971.2e-30290348259
                        --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                        +Dg++WrKYGqK+ kg+++pr+YYrCt++ gCpv+k+v+r+aed++++++tYeg+Hnh+
  Aqcoe5G223400.1.p 290 SDGCQWRKYGQKMAKGNPCPRAYYRCTMSmGCPVRKQVQRCAEDKTILTTTYEGNHNHP 348
                        7***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.9E-33274350IPR003657WRKY domain
SuperFamilySSF1182901.44E-27282350IPR003657WRKY domain
PROSITE profilePS5081129.608284350IPR003657WRKY domain
SMARTSM007742.2E-36289349IPR003657WRKY domain
PfamPF031061.5E-26291348IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 525 aa     Download sequence    Send to blast
METNSKEMVL LTQSHSAVFR KNSDDDENDQ HDWKQTPSCH VDFFSNHEKV PQHEMMNKAD  60
RPRSISYRSK GEEDCDDASI RIDDPHLNTG LHLHTFDLGI KGSITDEEKH KTSTDQHDQL  120
TTLKEELHRL HIENKKLKNT LDQIAKNYSV LEAQIVLVLQ QSQPRQTNLL QIRQKGETRN  180
DHQFMERPPT GFILDINEPS SQCSHIDTNQ HGSTSLDNCN ECSHSEQVMG RSRKRPYMED  240
RPEHDTLGSW GKNKCPKKIE QTKSIEQVPD ASLRKARVSV RARSDAPMIS DGCQWRKYGQ  300
KMAKGNPCPR AYYRCTMSMG CPVRKQVQRC AEDKTILTTT YEGNHNHPLP PSATAMANTT  360
SAAASMLLSG STASNETLTN SAALFPHLPY SASNIATLSA SAPFPTITLD LTHSPNSSQF  420
RCGPPPSTSF PFPMHGIQMQ PMCSPPKLSI QSAAQHGGQQ QSMVETITAA IATDPNLAAA  480
LASAVSSIMG ATPTWGSNGN QDNNSNDSRG TSKSSSSQEP SLHT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-20276351175WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017613399.11e-133PREDICTED: probable WRKY transcription factor 47
TrEMBLA0A2G5D3100.0A0A2G5D310_AQUCA; Uncharacterized protein (Fragment)
STRINGAquca_029_00028.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.13e-77WRKY family protein