PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G224100.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family C2H2
Protein Properties Length: 99aa    MW: 11056.5 Da    PI: 7.2495
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G224100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.16.6e-056485223
                       EETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                       kC dC   F  +s+L++Hi  +
  Aqcoe5G224100.1.p 64 KCCDCQNIFAVPSELTNHIAEC 85
                       7******************877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    Send to blast
MLGDTSVRPV LVLSVNNHRF VRHDFVEEGP RFFCVHCNTG TFFSSAKALH AHSRIHSVYS  60
SQNKCCDCQN IFAVPSELTN HIAECSDKLD YLHGLLHV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-