PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G225900.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 601aa    MW: 66996 Da    PI: 4.3965
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G225900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM54.73.4e-17141481128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv...ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                        +ppGf F Ptdeel++ yL +kv+g++  + ++i   ++y      P+++   +k++e+e+y F++ +kk+  gk   r++ +g W  +  +
  Aqcoe5G225900.1.p  14 VPPGFWFCPTDEELIKGYLWPKVAGQDQAFPNFIGVKNLYGEkveAPSQIF--AKTTEEELYCFTRLKKKNGGGKYIDRVVGKGAWVIQH-T 102
                        69*************************888777777777754223688885..456789***************************9775.5 PP

                NAM  90 kevlskkgelvglkktLvfy........kgrapkgektdWvmheyrl 128
                        +++++ k+ ++g  kt+ f         k++ ++    + +mhey+l
  Aqcoe5G225900.1.p 103 TPMYD-KNIEIGWMKTFRFSpdadkrskKKSCSSKDDISFIMHEYTL 148
                        88888.8899**********88875432222233345689*****98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-239166IPR003441NAC domain
PROSITE profilePS5100522.27914166IPR003441NAC domain
PfamPF023651.2E-1215148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 601 aa     Download sequence    Send to blast
MMTVRNREGQ SVVVPPGFWF CPTDEELIKG YLWPKVAGQD QAFPNFIGVK NLYGEKVEAP  60
SQIFAKTTEE ELYCFTRLKK KNGGGKYIDR VVGKGAWVIQ HTTPMYDKNI EIGWMKTFRF  120
SPDADKRSKK KSCSSKDDIS FIMHEYTLKY SQDLPQEWAL CRIYKKATGS AGGTNTSRRN  180
HSSSSKSAST LKRSAEQIDP MTCMPEMKCA KTLHGFALPP NNAPTTTSEM IFWQKDHDQY  240
LPPSDHPQPS THYYGNGTRS IAHASTSAPF SAMGMTSVNP IFLNDDEPIY IGNSQPKQEL  300
QTHICSGNND NRVSYVDNPE VMDNLASNGG EDRGPLSEED DVQHYLEDYS SQSFDQPQPA  360
AQGNPAALSD LQYADYDDLP SFGWDDLGPL SGEDDVQYYL EDDVGMLSSN YSSQSFDWRQ  420
PAAQGSPAAL SDPQCADYNN DGLLQQELNP QAQPPVLPSS NNNDKVCMHD ESESKLDASP  480
RTQSSAVSMP MILHPTTLED LPIKDRSSQP HLSAEHNETI FQRLTSDEDY SRLQQDSDNW  540
CLSSSAMEMS SYSPPHVNLP QVIEDILSTE IMCGDYDNGT CDLDILENPA FLNDVQSIVW  600
*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-12NAC family protein