PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G234900.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 672aa    MW: 74049.4 Da    PI: 5.2467
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G234900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM164.63.6e-5161341129
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                        lppGfrFhP d el+ +yLk+kv gk+l++ e+i+e+d+yk+ PwdLp k ++++++ ewyfF++rd+ky++g r+nrat+ gyWk+tg+d+
  Aqcoe5G234900.1.p   6 LPPGFRFHPMDVELILYYLKRKVMGKPLRI-EAIAELDLYKFAPWDLPdKsCLRSKDLEWYFFCPRDRKYNHGPRTNRATEIGYWKTTGRDR 96 
                        79****************************.89**************96347777888********************************** PP

                NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                        ++++ ++e+vg+kktL+f+ grap+g++t+Wvmheyrle
  Aqcoe5G234900.1.p  97 PICN-GSETVGMKKTLIFHLGRAPQGNRTNWVMHEYRLE 134
                        ****.9*******************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.75E-603156IPR003441NAC domain
PROSITE profilePS5100556.9386156IPR003441NAC domain
PfamPF023652.5E-267133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 672 aa     Download sequence    Send to blast
MARTSLPPGF RFHPMDVELI LYYLKRKVMG KPLRIEAIAE LDLYKFAPWD LPDKSCLRSK  60
DLEWYFFCPR DRKYNHGPRT NRATEIGYWK TTGRDRPICN GSETVGMKKT LIFHLGRAPQ  120
GNRTNWVMHE YRLELKDLVD VGISQDSYVL CKIFEKSGAG PKNGEQHGAP FKEEEWEDDL  180
EDDSLTLLPR INSEAPSVIV DAEKKAVAED SALVLGKTHE SSSQLPCQNE LSDTCKENIS  240
LLDGVDLGSL LALLGDGNDL SHIGSAYVED PPPSDNNDIF GGLNDLDITT ELKGIDNFEL  300
VNMEDSYVLG QTRLGEDMAY MELDDMERPL KYPVKGDGAN HIQNDNFAHR SEMEGGDEFG  360
CLNSLVSREN TYSMRLADLD FPVKYPLEVT SENVQSGGHF GYDNYDSLET LSVPFVSREA  420
VFHAPGVGSS RCILPKNSGA FADNLDLASN FNNHIGCGES SVCGYQVPNQ TPGVGSSRCI  480
HPKNSGVFAD NSNFKNHIGF GESSVCGYQV PHQTPENLSS GIEERVNTHS SQTFARGEQH  540
RANSRLRCLL GSIPARPASA AEFPSCINAG KGSKGKSLFA NHGGSSIHVK AEVTVRCGCT  600
DEALSGKLEG DPCLCCYGHK FFRRELGKEA APLSSGLTFV FLLGMITALM WVFLFSVVVK  660
IGCYVWKLPL F*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-50215611168Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026388314.11e-117NAC domain-containing protein 82-like
TrEMBLA0A2G5DE010.0A0A2G5DE01_AQUCA; Uncharacterized protein
STRINGAquca_022_00282.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.12e-80NAC domain containing protein 53