PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe5G237500.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

Dof

Protein Properties

Length: 300aa MW: 33303.6 Da PI: 4.9699

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe5G237500.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	114.9	3.4e-36	31	85	6	60
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +cprC stntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvP Ggg+rk ++ Aqcoe5G237500.1.p 31 PNCPRCASTNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPFGGGCRKTRR 85 58**************************************************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	3.0E-28	17	85	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.8E-31	31	85	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.192	31	85	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	33	69	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence Send to blast
MFNNPTDKLF SPHSGPLMMD PRWKTNVEIA PNCPRCASTN TKFCYYNNYS LSQPRYFCKG 60 CRRYWTKGGS LRNVPFGGGC RKTRRGKAVR SSSSHDLGRV GSSYSPSSQP SFDGNSGSSD 120 GNFEDSSLSG KAGSNIDLAD VFSKFLHQDS GSSDTSSAVP DISDPDYDQP VRFGHHFQQE 180 NIIIDGIIPE NPILDMEFTG VIQPEFDVIN TERLQQYTDP GIETGLEGLQ AFLNDGIAQD 240 ILWSESPALP NFSWQQNQHL QGYGCDEAAV LDDHSMFHNN LLNGNWNSFD IPSYAYYKK*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	2e-36	Dof family protein

Link Out ? help Back to Top
Phytozome	Aqcoe5G237500.1.p