PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G237900.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 381aa    MW: 42640.3 Da    PI: 4.5848
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G237900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.81.4e-06182222853
                        HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
                HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                         Er+RR+r+ + +  Lr+l+P+      +K++K ++L  A  Y+++
  Aqcoe5G237900.1.p 182 SERNRRKRLSKQLLSLRSLVPNI-----TKMDKRSVLVDALSYLRK 222
                        6*********************7.....6**************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.665174223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.12E-6177228No hitNo description
SuperFamilySSF474595.76E-12178241IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-9180238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.9E-6180229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MGTQLDVLPS QEPTTQQDII CPWLDLDDEF FQQELQDLEN HLFDVATDPI SSSSSSLPRP  60
QGSPSFMLDD LYNNIINNAQ QAGLQPNDQR PILPVQPCVE PDVCDTFLNG SEFGLISPTD  120
HLSPDIHDQF CETMISGLLM KPLSGDVEIS EPMITMAKET DEDGTDEDRP KQGTLNSKNM  180
VSERNRRKRL SKQLLSLRSL VPNITKMDKR SVLVDALSYL RKIREETENL EKEIKEHQTS  240
SGPKLSDLRE TSQDPLSAGT LGIPRTASAS VTYPKPKAQI TEIDTEKIED KRFIVKITCK  300
GGVGVGSDVL RVFESMDFEI TYAALQQLQP QVVLVTIFVR VKKQWKMTEQ KLKYSITSMA  360
LRTGLSLSNP LFDQRHSGDE *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DE230.0A0A2G5DE23_AQUCA; Uncharacterized protein
STRINGAquca_022_00304.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.37e-06bHLH family protein