PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G240700.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 517aa    MW: 59304.9 Da    PI: 4.3602
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G240700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.21.4e-18371681128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv...ePwdLpkkvkaeekewyfFskrdkkyat..gkrknr.atksgyWkat 86 
                        lp G+rF+P+d+ l+++yL +k+ gk+l++ + i e  iy     eP+++  + ka ++e+y F+  +kk ++   k  +r ++ +g+Wk +
  Aqcoe5G240700.1.p  37 LPLGYRFRPSDDVLIKYYLYNKAFGKPLPVLNLIVEKTIYGDeakEPSQIT-AGKAVNEELYIFTLIKKKFNKveAKYISRdVAGKGTWKIQ 127
                        699***************************999***999975333799997.344556799***998888775225566777889*****88 PP

                NAM  87 gkdkevlsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                          d +v+++   k+ ++g  k + +     +k ek +W+mhey+l
  Aqcoe5G240700.1.p 128 KGD-NVYDSpnnKSIVIGYMKPFKYV---PKKYEKKSWIMHEYTL 168
                        765.5555545566669999999999...5555689*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.84E-2233188IPR003441NAC domain
PROSITE profilePS5100526.27637189IPR003441NAC domain
PfamPF023652.0E-1438168IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 517 aa     Download sequence    Send to blast
MMIREEEGKE EEEEGKEEEE EEKEEEQQQQ QRVALQLPLG YRFRPSDDVL IKYYLYNKAF  60
GKPLPVLNLI VEKTIYGDEA KEPSQITAGK AVNEELYIFT LIKKKFNKVE AKYISRDVAG  120
KGTWKIQKGD NVYDSPNNKS IVIGYMKPFK YVPKKYEKKS WIMHEYTLRN YPPSKDCQGE  180
WALCRIKRGS DNKEDEIKME DESSLYKTDL ERTADQINED QSPYMPENKR MRYTSLVLPQ  240
TTKVYTPMFD IGFSQKDQYN QYLHPNIVGT RPQKPDHPQP HQTLLGPFSI YTTSMNPTIF  300
KDMPDNSNPQ PYHNSTNAAQ CVLPSVVQDD KAFIQDYSSM ELNDTIEEQG MMTLPTTDDY  360
HYQIQPDHNG TKIAAQHDCQ HAFNDNGLCS FSNLEPARCE LSSAVGVDVD PLQDHSGMQV  420
MDTILPGDDL NLSKEDYLSP PQPEYNAINA AQQDYCQSVF NDYDLCSLAS FEPLSEADFT  480
DQDEIDIIRN YLDSNNSDNN VAVPTYDETL CQSAVF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.18e-18NAC-like, activated by AP3/PI