PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G273600.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 493aa    MW: 55244.1 Da    PI: 6.1479
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G273600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.61.7e-30247306159
                        ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                        ++Dg++WrKYGqK  kg+++pr+YYrCt + gCpv+k+v+r++ed +++++tYeg+Hnh+
  Aqcoe5G273600.1.p 247 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVSpGCPVRKQVQRCQEDMSILITTYEGTHNHP 306
                        58**************************999****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-32232308IPR003657WRKY domain
SuperFamilySSF1182902.09E-27241308IPR003657WRKY domain
PROSITE profilePS5081129.608242308IPR003657WRKY domain
SMARTSM007741.9E-37247307IPR003657WRKY domain
PfamPF031061.7E-27248306IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 493 aa     Download sequence    Send to blast
MVLEKTMQFD LSLKVESQDV ELVQLEVDQV EEIQLNHHHH VDPNKDSEVE VIEEEQQQQV  60
QDIASHDDEK SLQKSSKSHE LSELLVEMNR MKEENKVLRK VVEQTMKDYF DLQKKLASNQ  120
QNDSITKDTE IFLSLHGEGD DIIQGSKKKD GGVNTVNQKN LMCQDDEEMD TTELGLSLRM  180
KTHVDEHELE ETMEGDKNKE MLSNLAPSLN NSFKSTSDQL QQGGQMSSPP NRKARVSVRA  240
RCQDATMNDG CQWRKYGQKI AKGNPCPRAY YRCTVSPGCP VRKQVQRCQE DMSILITTYE  300
GTHNHPLPVG ATAMASTTSA TANYMLSRGH SSSHSSTADT IENIQTAGFR RNSHSSSFHS  360
MFNTNDPSKG VHVLDLTNNA YSQQQQYTQH PNSAHSHLQL NYPWAPNNSG YKNHGRNSQK  420
EDLDSENVSA IASDPKFRVA VAAAITSFIT KENQTVPPTS SRVRNENSAT SGPNKWVLES  480
FPSSGKTIQH LQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-22234310176WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC4852886e-33KC485288.1 Jatropha curcas WRKY transcription factor 36 (WRKY36) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010245089.11e-130PREDICTED: probable WRKY transcription factor 9
TrEMBLA0A2G5DBX30.0A0A2G5DBX3_AQUCA; Uncharacterized protein
STRINGAquca_023_00066.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.16e-63WRKY DNA-binding protein 9