PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe5G283100.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

Protein Properties

Length: 150aa MW: 17125.5 Da PI: 6.392

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe5G283100.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	35.5	1.8e-11	29	109	2	86
EEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldg 86 +lt+s+v++ ++ +pkkf + + l + + + ++ + ++ + +tkGW++Fv+a +LkegD++vF+ ++ Aqcoe5G283100.1.p 29 THILTKSNVSEVFNMQIPKKFHPFLpfySV---D--RVNLIH-NKQIFKTET--QNDRHDhLKFTKGWRDFVRALNLKEGDSCVFEIIK 109 567889999999999999999755453221...2..355555.556777777..343333389***********************765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101936	6.87E-15	23	110	IPR015300	DNA-binding pseudobarrel domain
Gene3D	G3DSA:2.40.330.10	9.6E-14	24	110	IPR015300	DNA-binding pseudobarrel domain
PROSITE profile	PS50863	9.53	28	126	IPR003340	B3 DNA binding domain
Pfam	PF02362	8.3E-9	30	109	IPR003340	B3 DNA binding domain
CDD	cd10017	2.30E-11	31	106	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 150 aa Download sequence Send to blast
MAGSSSGSAR AINSCEHKPL QEDTHWLWTH ILTKSNVSEV FNMQIPKKFH PFLPFYSVDR 60 VNLIHNKQIF KTETQNDRHD HLKFTKGWRD FVRALNLKEG DSCVFEIIKP LPSDPIEIMV 120 QILSGDLPEE LITREANRGT SDESPIIID*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5C7I8	1e-107	A0A2G5C7I8_AQUCA; Uncharacterized protein
STRING	Aquca_082_00029.1	1e-107	(Aquilegia coerulea)

Link Out ? help Back to Top
Phytozome	Aqcoe5G283100.1.p