PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G353100.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family CAMTA
Protein Properties Length: 920aa    MW: 103251 Da    PI: 6.2969
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G353100.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1169.74.6e-53231392117
               CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenp 92 
                        ++e + rwlk+ e++ iL+n+  h+lt+++ ++p sgsl+L+n++++r+frkDG++w+kkkdg+tv E+he+LKvg+ve+l+cyYah+e +p
  Aqcoe5G353100.2.p  23 VQEaHYRWLKPAEVLFILQNHGDHQLTETPLQKPLSGSLFLFNKRVLRFFRKDGHNWRKKKDGRTVGEAHERLKVGNVEALNCYYAHGEVTP 114
                        566689************************************************************************************** PP

               CG-1  93 tfqrrcywlLeeelekivlvhylev 117
                        +fqrr+yw+L+ ++e+ivlvhy+e 
  Aqcoe5G353100.2.p 115 NFQRRSYWMLDPAYEHIVLVHYREI 139
                        **********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143778.24119145IPR005559CG-1 DNA-binding domain
SMARTSM010762.3E-7422140IPR005559CG-1 DNA-binding domain
PfamPF038593.6E-4625138IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.108.7E-10458545IPR013783Immunoglobulin-like fold
CDDcd001022.40E-4462545No hitNo description
PfamPF018333.2E-7463545IPR002909IPT domain
SuperFamilySSF812967.84E-19463545IPR014756Immunoglobulin E-set
Gene3DG3DSA:1.25.40.208.6E-15650744IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.91652744IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484033.73E-15655746IPR020683Ankyrin repeat-containing domain
CDDcd002041.15E-14657744No hitNo description
PfamPF127969.8E-8658745IPR020683Ankyrin repeat-containing domain
SMARTSM002480.0057685714IPR002110Ankyrin repeat
PROSITE profilePS5008810.499685717IPR002110Ankyrin repeat
SMARTSM002481800724753IPR002110Ankyrin repeat
SMARTSM0001520802824IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.943803829IPR000048IQ motif, EF-hand binding site
SMARTSM000150.62860882IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.187862890IPR000048IQ motif, EF-hand binding site
PfamPF006120.0074863881IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 920 aa     Download sequence    Send to blast
MMMKSCKRRP IRIVEGYDIK ELVQEAHYRW LKPAEVLFIL QNHGDHQLTE TPLQKPLSGS  60
LFLFNKRVLR FFRKDGHNWR KKKDGRTVGE AHERLKVGNV EALNCYYAHG EVTPNFQRRS  120
YWMLDPAYEH IVLVHYREIN EGRLRSASNS QGSPGLSYTS SQSPSFSSAY HPAAASEQHD  180
AYVSSFSPES VEVSSEIVSR NKIMGQMNGE SRVGDLGRLP KVEVGQALRR LEEQLSLNDD  240
DIEELFPRYG QNNNNLELLG SERTSYQDEL AVRTSIESRS ELQHVGPQED SKSDLFVQVS  300
GDNGKQHLQH VGPEYKIERK DTPFWKETLE LCSDYTWTNL EEKSLNTSER SPQKWTPHWL  360
DLRSNNAENK NEYISTSENS FSQQLSEAKH FLLGSDDAIV SPTVPSLPQE YESYETNASP  420
FTLSSCGENS DHYKNVFELE SQPTYSHRSD VNLPPAQTHK FSIQEISPEH GYTTENTKVI  480
ITGYFLCDPS TCAWACMFGD IEVPVQIVQE GVLRCHAPPN IPGKVSLCIT SGNRVSCSEV  540
REFEYFVRPS SCSNGYSSEK ESTWSTEELL LLVRLAHMLL SDSLVQKNNK VELGICKEDP  600
WELVIEDLLV GTATPSGTTD WILQELLKDK LQQWLSSKYQ EGNTSSCSLS RKEQGIIHMA  660
AGLGFEWALI PILNSGVSIN FRDINGWTAL HWAARFGREK MVASLVASGA SALAVTDPTS  720
QDPSGKTPGI IAAASGHKGL AGYLSELALT SHLSSLRLEE SEISKGSAVV EAERTVESIS  780
KGSLGSTEDQ LSLKDSLAAV RNAAQAAARI QSAFRAHSFR RRQQIESSTG AYDENGITQD  840
DIYGLSNASK LAFRNLRDHS VDKAALSIQK KYRGYKGRKD FLAIRQKVVR IQVYHHIQLS  900
PYLIINNNII TFNFIYDHE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026385470.10.0calmodulin-binding transcription activator 4-like
TrEMBLA0A2G5E5N30.0A0A2G5E5N3_AQUCA; Uncharacterized protein (Fragment)
TrEMBLA0A2G5E6B60.0A0A2G5E6B6_AQUCA; Uncharacterized protein (Fragment)
STRINGAquca_011_00130.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.10.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains