PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G389300.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family GATA
Protein Properties Length: 259aa    MW: 28646.7 Da    PI: 9.2683
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G389300.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.87.1e-1987121135
               GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                        C nC+tt Tp+WR gpdg+ktLCnaCG++ +kk++
  Aqcoe5G389300.2.p  87 CLNCKTTRTPQWRDGPDGPKTLCNACGIRLKKKRM 121
                        99******************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF577163.04E-1479121No hitNo description
SMARTSM004015.8E-1681131IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.101.9E-1685121IPR013088Zinc finger, NHR/GATA-type
CDDcd002025.35E-1486124No hitNo description
PfamPF003202.6E-1687120IPR000679Zinc finger, GATA-type
PROSITE profilePS5011412.38787117IPR000679Zinc finger, GATA-type
PROSITE profilePS5152514.571178258IPR027353NET domain
PfamPF170351.1E-16187249IPR027353NET domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MLESVLEMCK IKKHLINKEL LANDPSSAAG VIQSSPSKKQ KLSSSPSSSG DTTHVGTKGS  60
QSRDRASSFG DIGSSEESQS RGLTKICLNC KTTRTPQWRD GPDGPKTLCN ACGIRLKKKR  120
MSPLGANEAN KKLKQEDDDD LRIILESSGS LAKEAVKKYS DEMFGKLGDM EQQLEKCLDV  180
IMSKCRKMAH PEKQQLRKLI QNLPPKNLDR VVDIIVKHRK SSEGPCSEIH INLENEDNGT  240
LWRLYYYVEA VARASNLS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010248715.13e-78PREDICTED: uncharacterized protein LOC104591545 isoform X1
RefseqXP_010248716.13e-78PREDICTED: uncharacterized protein LOC104591545 isoform X1
RefseqXP_010248717.13e-78PREDICTED: uncharacterized protein LOC104591545 isoform X1
TrEMBLA0A2G5E7190.0A0A2G5E719_AQUCA; Uncharacterized protein
TrEMBLA0A2G5E7J70.0A0A2G5E7J7_AQUCA; Uncharacterized protein
STRINGAquca_011_00414.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08000.21e-16GATA transcription factor 10