PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe5G421600.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

bHLH

Protein Properties

Length: 249aa MW: 28652.5 Da PI: 6.7785

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe5G421600.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.7	3.6e-12	79	129	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+E++RR+++ + Lr+l+P+ ++K s ++ +A++YI++ q Aqcoe5G421600.1.p 79 IMHREVEKQRRQEMAGLYRSLRSLVPHeY---LKGKRSTSDHMNEATNYIRHQQ 129 58***********************77...9*****************88 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	6.8E-13	75	144	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	12.62	76	128	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	6.7E-9	80	146	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	4.5E-9	80	129	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.63E-8	81	133	No hit	No description
SMART	SM00353	4.4E-4	82	134	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence Send to blast
MNDYDMNHLN PLKQMNELLY QIPLISFQQE MDPPSCDFDP FIKLDKIQQK GNRKSFESSN 60 KIDEGGCNNN NNNNKKIKIM HREVEKQRRQ EMAGLYRSLR SLVPHEYLKG KRSTSDHMNE 120 ATNYIRHQQI KIKELVKKRD ELKRISNSST CDTEKQSCCS QNFVTVQPRL AGVEVIVDCD 180 LKNRGLALSE ILGVLAEEEL EVICCATTKV NEHSFYSIQA EVLNPDSVDL SSLQHKLIDL 240 NHLYENHS*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011041656.1	2e-52	PREDICTED: transcription factor bHLH118-like
TrEMBL	A0A2G5CWX2	1e-159	A0A2G5CWX2_AQUCA; Uncharacterized protein
STRING	Aquca_035_00248.1	1e-160	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51790.1	4e-36	bHLH family protein

Link Out ? help Back to Top
Phytozome	Aqcoe5G421600.1.p