PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G443700.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bZIP
Protein Properties Length: 397aa    MW: 41832.3 Da    PI: 7.4994
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G443700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1621.2e-19252314163
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        e++lkre+rkq+NRe+ArrsR+RK+ae eeL+ kv++L aeN aL++e+++l ++++kl+ e+
  Aqcoe5G443700.1.p 252 ERALKREKRKQSNRESARRSRLRKQAESEELALKVESLNAENLALRSEMNRLAENSEKLRIEN 314
                        799*******************************************************98776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077777.4E-32191IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165966.8E-9123235No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-14245311No hitNo description
PfamPF001701.2E-17252314IPR004827Basic-leucine zipper domain
SMARTSM003382.2E-14252316IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.472254317IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.56E-9255310No hitNo description
CDDcd147021.56E-19257305No hitNo description
PROSITE patternPS000360259274IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    Send to blast
MGSSEAETEP KSEKPPSPAP EQTNVHVYPD WAAMQAYYGA GVALPPPYFN SAGATGHPPH  60
PYMWGPPPMM TPYGSPYAAM YPHGGIYAHP SASLGSHGHG VPSSPAVAEA TVATQSKSTS  120
TKDQGLKKKS KGSNGLAVSI GNVNDGSAAG SQSEEGTGGS SDGSDGNTEA GGDQVQRKRS  180
RDGTPPGGKE GKVDQQDVCV LGGEANRKAP ALELIVSSTG KRKATAVSVP PTTDTAMPAR  240
DHLPSELWMK DERALKREKR KQSNRESARR SRLRKQAESE ELALKVESLN AENLALRSEM  300
NRLAENSEKL RIENTALMER LNDAQSGLAE KAVSNKAEVL TPVPVSTENF LSRVHNSDSV  360
TLNHHLENGA HENSNSGAKL HQLLKSSPRA DAVAAG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1268274RRSRLRK
2268275RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8672884}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010261472.11e-140PREDICTED: common plant regulatory factor 1-like isoform X1
SwissprotP427761e-102GBF3_ARATH; G-box-binding factor 3
TrEMBLA0A2G5CT740.0A0A2G5CT74_AQUCA; Uncharacterized protein
STRINGAquca_037_00034.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.14e-73G-box binding factor 3
Publications ? help Back to Top
  1. Obayashi T, et al.
    ATTED-II: a database of co-expressed genes and cis elements for identifying co-regulated gene groups in Arabidopsis.
    Nucleic Acids Res., 2007. 35(Database issue): p. D863-9
    [PMID:17130150]
  2. Song L, et al.
    A transcription factor hierarchy defines an environmental stress response network.
    Science, 2017.
    [PMID:27811239]
  3. Ramegowda V, et al.
    GBF3 transcription factor imparts drought tolerance in Arabidopsis thaliana.
    Sci Rep, 2017. 7(1): p. 9148
    [PMID:28831141]