PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G456200.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 318aa    MW: 34801.9 Da    PI: 8.7379
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G456200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-18116166256
                AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                         y+GVr+++ +g+WvAeIr p +   r r++lg+++tae Aa a+++a+ kl+ge
  Aqcoe5G456200.1.p 116 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEVAAYAYDRAAYKLRGE 166
                        59******9.**********954...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.86E-22115175No hitNo description
SuperFamilySSF541713.53E-22116173IPR016177DNA-binding domain
PROSITE profilePS5103222.985116173IPR001471AP2/ERF domain
SMARTSM003804.2E-34116179IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-30116174IPR001471AP2/ERF domain
PfamPF008479.3E-13117166IPR001471AP2/ERF domain
PRINTSPR003675.3E-10117128IPR001471AP2/ERF domain
PRINTSPR003675.3E-10139155IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MPGTFENKAQ FQFSDDIRSS LSELILSGGT NTLDSIFSNY RPSSSNAVTN HIPESIGSSV  60
YHRQKELLQK FTIDNMYNSA ANCMALHTPQ TVQSHMYVNT CSGSGSGSSS SNGKKLYRGV  120
RQRHWGKWVA EIRLPQNRMR VWLGTYDTAE VAAYAYDRAA YKLRGEYARL NFPNLGDEMK  180
LGIADRSRLS ALRVTIDAKI QAICQKVRRE KGSKASKKTS ATSSKSDTGI KVEPSSLSAS  240
SSSSSSSLFG TPNDSWYNNE MFSPSVSEGM SMSTDNSSSP VVSTDCPMVL KDFGCDGCSL  300
ARMPSYDPEL IWEVLAN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-20115173160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021894819.12e-90ethylene-responsive transcription factor ERF061
TrEMBLA0A2G5CTN10.0A0A2G5CTN1_AQUCA; Uncharacterized protein
STRINGAquca_037_00132.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.15e-63ERF family protein