PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe6G048300.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

WRKY

Protein Properties

Length: 205aa MW: 23327.8 Da PI: 5.8934

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe6G048300.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	92.5	3.1e-29	118	176	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDgy+WrKYG+K+vk+s++pr+YYrC + gC+vkk+ver++ed ++v++tY g H+he Aqcoe6G048300.1.p 118 MDDGYKWRKYGKKSVKNSPNPRNYYRCNHVGCQVKKRVEREREDSSYVITTYDGVHTHE 176 59********************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	3.5E-32	106	178	IPR003657	WRKY domain
SuperFamily	SSF118290	5.49E-28	110	178	IPR003657	WRKY domain
PROSITE profile	PS50811	29.757	113	178	IPR003657	WRKY domain
SMART	SM00774	1.4E-33	118	177	IPR003657	WRKY domain
Pfam	PF03106	3.1E-23	119	176	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009867	Biological Process	jasmonic acid mediated signaling pathway
GO:0042742	Biological Process	defense response to bacterium
GO:0050832	Biological Process	defense response to fungus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 205 aa Download sequence Send to blast
MSGYSSLPTN MPEQYSNLNH GYTYLMDHLD ISDMDFEVSD FLVPEAGGTS EEDSTTTHIE 60 YEPSNPVLPE QFDESVGHDG SGDKRRPNNI KPKSAKKTKM DVGQFRVAFR TKSELEIMDD 120 GYKWRKYGKK SVKNSPNPRN YYRCNHVGCQ VKKRVERERE DSSYVITTYD GVHTHESPSI 180 VYYNEMPLMV PNGWTLQASQ SSCS*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
2ayd_A	1e-23	106	178	2	74	WRKY transcription factor 1
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Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Involved in defense responses. May act as positive regulator of salicylic acid (SA)-mediated signaling and negative regulator of jasmonic acid (JA)-mediated signaling (PubMed:21030507). {ECO:0000250, ECO:0000269\|PubMed:21030507}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010261070.1	3e-71	PREDICTED: probable WRKY transcription factor 51 isoform X1
Swissprot	Q93WU9	1e-42	WRK51_ARATH; Probable WRKY transcription factor 51
TrEMBL	A0A2G5DWH4	1e-152	A0A2G5DWH4_AQUCA; Uncharacterized protein
STRING	Aquca_014_00461.1	1e-153	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	5e-45	WRKY DNA-binding protein 51

Link Out ? help Back to Top
Phytozome	Aqcoe6G048300.1.p

Publications ? help Back to Top
Yan C, et al. Injury Activates Ca2+/Calmodulin-Dependent Phosphorylation of JAV1-JAZ8-WRKY51 Complex for Jasmonate Biosynthesis. Mol. Cell, 2018. 70(1): p. 136-149.e7 [PMID:29625034]