PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G080000.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family Trihelix
Protein Properties Length: 333aa    MW: 37995.9 Da    PI: 5.2957
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G080000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix582.5e-1833115286
           trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                        W + e+  Liea++e++ +l+rg+lk+ +Weev++++      + ++++++qC++k+e+l+kry+ +k++        +  ++yfd ++
  Aqcoe6G080000.1.p  33 WAHIETVNLIEAYQEKWYSLKRGQLKASQWEEVASAVaarcGFKELSKTATQCRHKMEKLRKRYRTEKQRGTPI----V--WAYFDMMD 115
                        9*********************************99964444556789*******************9988764....4..88888886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.3E-1932117No hitNo description
SMARTSM005954.1E-640122IPR006578MADF domain
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MSQPSSSSIP TPSQQKNSPK TPSIPKKIPP IPWAHIETVN LIEAYQEKWY SLKRGQLKAS  60
QWEEVASAVA ARCGFKELSK TATQCRHKME KLRKRYRTEK QRGTPIVWAY FDMMDMMERG  120
PFPLSARPIS LMQPSSQPSP LSASSQYNQN QRVSQSSEDD DDEDEEEINE EDEDENNKLR  180
SINRLIRRPP MASPIFDALP LPNKYGGGSG GSGGREGQGP GVSRFLRSPM FQKRKRLYEI  240
EVEEEEVEEE EEEEVEGGRL LSELASVVRA FGEGFVKVEN MKLEMMKEAE KHRIEMEKKR  300
MEMIQESQRC IVDAIAKTFE SNKKPKMTQE DS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010273015.12e-94PREDICTED: uncharacterized protein LOC104608663
TrEMBLA0A2G5E8J40.0A0A2G5E8J4_AQUCA; Uncharacterized protein
STRINGAquca_010_00154.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.17e-28Trihelix family protein