PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G095900.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family G2-like
Protein Properties Length: 398aa    MW: 43744.1 Da    PI: 6.64
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G095900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.41.2e-31261316156
            G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                        k+r++W+ +LH+rF++a++qLGGs+ AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  Aqcoe6G095900.1.p 261 KQRRCWSADLHRRFLNALQQLGGSQAATPKQIRELMKVDGLTNDEVKSHLQKYRLH 316
                        79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.985258318IPR017930Myb domain
SuperFamilySSF466891.02E-17259319IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.3E-28260319IPR009057Homeodomain-like
TIGRFAMsTIGR015572.5E-27261316IPR006447Myb domain, plants
PfamPF002491.6E-6263314IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MGELSLDLKP TTTITTSSSS TITTNYMPES IHVFLGEVSL IGNVSEKLSK ADEFIQRLEE  60
EMNKIDAFKR ELPLCMVLLN DAIDLLKREV MQWKKSGSSS ASVMMENFVP SKTNSSSEID  120
LRDKKNWMSS AQLWTSNGYS SKTDDEKPKS IVDEMVKKDD GSAITTETNL PRNGGGGAFV  180
PFKGFTGFLT STRMEEKERE IHQLEASLSL LTPGVRKPRT EPTSCLMNSK TTGGSRGLPT  240
SSAEKTQTNL HLPLQSQPPR KQRRCWSADL HRRFLNALQQ LGGSQAATPK QIRELMKVDG  300
LTNDEVKSHL QKYRLHTRKF PANASSPGPE NQKLALFGGL WAPEDQCGAS KASTSQSESP  360
QGPLQLMTSG GSTTGDDSME DDEEDGKSES YNWKGHA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010263747.11e-122PREDICTED: myb family transcription factor EFM
TrEMBLA0A2G5E9B30.0A0A2G5E9B3_AQUCA; Uncharacterized protein
STRINGAquca_010_00298.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.19e-57G2-like family protein