PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G101400.3.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family B3
Protein Properties Length: 257aa    MW: 29595.8 Da    PI: 9.8438
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G101400.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.28.1e-151593799
                       EEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                 B3 37 tledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                       +l+d+ gr+W v++  +   + +++++GW+eFvk + L +g+f+vF++dg+s+f   vk++++
  Aqcoe6G101400.3.p  1 MLKDSVGRVWHVEV--KEVENDFFFQSGWQEFVKMHSLVVGEFLVFRYDGNSTF--EVKLYDH 59
                       6899**********..999999****************************9999..8887776 PP
2B346.95.1e-151592411296
                        HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEE CS
                 B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkv 96 
                        ++  + +pk+ + ++++k   + ++ l+d++g+sW   +++ k +++  + +GW +F+k n+Lke+D + F++ ++ s++++ + v
  Aqcoe6G101400.3.p 159 ARYFVHIPKQVLIDNNIK--IQPKIFLRDPNGKSWPASVRFAKDGRTQ-ICSGWYDFCKGNNLKENDKCKFEFLQTrSRGKFIIDV 241
                        555678*****9999665..4449***************998887665.666********************88776988877765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM010190.62160IPR003340B3 DNA binding domain
PfamPF023621.7E-12158IPR003340B3 DNA binding domain
PROSITE profilePS5086314.833160IPR003340B3 DNA binding domain
CDDcd100175.77E-13258No hitNo description
Gene3DG3DSA:2.40.330.106.5E-16262IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019365.49E-16265IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.4E-18141242IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.35E-19143244IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086312.985148245IPR003340B3 DNA binding domain
SMARTSM010196.0E-8149245IPR003340B3 DNA binding domain
CDDcd100176.59E-13151239No hitNo description
PfamPF023621.2E-13163241IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MLKDSVGRVW HVEVKEVEND FFFQSGWQEF VKMHSLVVGE FLVFRYDGNS TFEVKLYDHS  60
GCEKEETLDD KNINKAVCFI KEEDNKEASN ARRKPILAIC DSKHKGSKVL KKADKSRYGF  120
SRPERISAKY VQKNMVSKAS ETDQPKPHFD VVVNGNGTAR YFVHIPKQVL IDNNIKIQPK  180
IFLRDPNGKS WPASVRFAKD GRTQICSGWY DFCKGNNLKE NDKCKFEFLQ TRSRGKFIID  240
VHIPRTKRKG FCVADT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5E9H50.0A0A2G5E9H5_AQUCA; Uncharacterized protein
STRINGAquca_010_00344.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.16e-20B3 family protein