PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G101700.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family G2-like
Protein Properties Length: 339aa    MW: 37645.5 Da    PI: 7.7609
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G101700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1017.5e-32127180255
            G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                        pr+rWt++LH++Fv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Aqcoe6G101700.1.p 127 PRMRWTTTLHAHFVHAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 180
                        9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.56E-15124181IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.6E-28125181IPR009057Homeodomain-like
TIGRFAMsTIGR015573.6E-23127180IPR006447Myb domain, plants
PfamPF002492.2E-7128179IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0080060Biological Processintegument development
GO:0005618Cellular Componentcell wall
GO:0005634Cellular Componentnucleus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MKTASTFPDL SLHISPPSVS DSEGNKDLGF DSAMRRVICG DRSSASSSGS DISHEQGLLN  60
LEKCYHRNGV EPKLSLGIEM ERFDPSPISL QRNLHYLHHL HHPQMFGKEF KRNSRMGNGG  120
KRSVRAPRMR WTTTLHAHFV HAVELLGGHE RATPKSVLEL MNVKDLTLAH VKSHLQMYRT  180
VKSTDKGPGQ GQTEMGLNQR TDVLEVEGGL SCEKADINPS HSIHQTLPLQ PPPSPPGPPL  240
PVSPGFEQGG VERNAWSPLT KENQTTRVHF QSKESSDKPT KEVYRPDPLV VCPNESDKLY  300
VSSLASSHML PNLEFTLGRQ SWQMDYVEPS KELTLLNC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-16128182458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-16128182458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A2e-16128182357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-16128182357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-16128182357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-16128182357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-16128182458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-16128182458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-16128182458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-16128182458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-16128182458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-16128182458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00107PBMTransfer from AT5G42630Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010255045.11e-131PREDICTED: probable transcription factor KAN4 isoform X1
TrEMBLA0A2G5E9H70.0A0A2G5E9H7_AQUCA; Uncharacterized protein
STRINGAquca_010_00347.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42630.11e-56G2-like family protein