PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G109900.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 160aa    MW: 18510.2 Da    PI: 4.403
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G109900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.86.6e-17221343126
                NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                         G+ F Pt+ +lv++yL++k   ++++l   i+evd+y  +P+dL +k+ +  + wyfF+++  ++    ++     +g W    k k+v++
  Aqcoe6G109900.1.p  22 FGYVFIPTEGQLVDYYLRNKNLCNSMDL-CPIEEVDVYANHPQDLAEKHPNIAEIWYFFTHSPPNE---IQAGID-IQGQWVVCEK-KDVFN 107
                        6999*********************999.67**************97766777899****987754...344444.46***97755.89999 PP

                NAM  95 kkgelvglkktLvfykgrapkgektdWvmhey 126
                         ++e+vg+++ L + +g++++    +  + ey
  Aqcoe6G109900.1.p 108 -QEEKVGVQQLLEYCEGDHKS----KYKIIEY 134
                        .8999**********887655....5555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.93E-2016154IPR003441NAC domain
PROSITE profilePS5100517.70620156IPR003441NAC domain
PfamPF023652.6E-1123136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MTNSKAITIW LCSVMCLPLV VFGYVFIPTE GQLVDYYLRN KNLCNSMDLC PIEEVDVYAN  60
HPQDLAEKHP NIAEIWYFFT HSPPNEIQAG IDIQGQWVVC EKKDVFNQEE KVGVQQLLEY  120
CEGDHKSKYK IIEYQLDPAP ENLETGLWFV CKLFNGERW*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008371998.23e-44NAC domain-containing protein 68-like
TrEMBLA0A498JTS68e-43A0A498JTS6_MALDO; Uncharacterized protein
STRINGXP_008371998.12e-43(Malus domestica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.17e-13NAC-domain protein 101