PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G122000.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 382aa    MW: 42940 Da    PI: 5.7174
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G122000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.61.3e-09188235455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Aqcoe6G122000.1.p 188 SHSLAERVRREKISERMRYLQDLVPGC----NKIIGKAGMLDEIINYVQSLQ 235
                        8**************************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.08E-8182239No hitNo description
SuperFamilySSF474591.57E-16182251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.9E-17184252IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.237184234IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.2E-7188235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.5E-8190240IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0009637Biological Processresponse to blue light
GO:0009911Biological Processpositive regulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MNATEITVLE RQQSQLQWQQ QKQHYFEDTH FNLTMNEASL MNNEYRSMKI DPDFDNGWPG  60
LAKYPLHRTG FGGENLPGFV STESADMNSS ISRTFSCPPE KLTSSIGRES FKKRKASDKS  120
VGAENINEKK IKGEVEEVAS KINEQIHNNK NNNRETCGDI SKENSKVSEV QKTEYIHVRA  180
RRGQATDSHS LAERVRREKI SERMRYLQDL VPGCNKIIGK AGMLDEIINY VQSLQRQVEF  240
LSMKLATVSP QVDSNIDNFF AKEMFQSTAD SYPTIGMLSE VLNPTCYQQL NAVQQVLTCG  300
GLNMDINLAE MPLERTTSTP VSMPGEFLDS SSFSQAQPPS AWENDLQSLY NTGFRHQGRS  360
TAFSSEPFNG NLAASNLKME I*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018851563.11e-135PREDICTED: transcription factor bHLH63-like
TrEMBLA0A2G5EAB60.0A0A2G5EAB6_AQUCA; Uncharacterized protein
STRINGAquca_010_00514.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.14e-57cryptochrome-interacting basic-helix-loop-helix 1