PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G127300.8.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 422aa    MW: 46390 Da    PI: 6.8308
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G127300.8.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.65.9e-053113491255
                        HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  Aqcoe6G127300.8.p 311 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 349
                        7788899*********998.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.909299348IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.02E-11309362IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.33E-5309353No hitNo description
Gene3DG3DSA:4.10.280.101.1E-8313356IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    Send to blast
MESANLHHQH QLHQDQFSGS SSLSTPSFYG GVHNNSSWNQ NTLLNSAGNL NLNADGFISN  60
SRDSRQTNVH DLVPPSIDTS MIQDLGYPNW VTNNFTNQSA HDLHLAKIKE ELSESAISCS  120
SSSPEDYHLP STSYIRHDHR GDIHDLNENI FLKNFSSNCQ LNELQGGSLY SNSSQSTPSF  180
GGLATPNRGN FSQIFPTANI SNPNSSFLSS SGMNLQVLDL LTSTNFSGGF NHQLAHNNLG  240
LFKEAPSFSH DHLKEPSHWL TNSHNKVSSF INGVTETKRS NSSVSEAKAS HTASKKPRLE  300
SRSSLAPFKV RKEKLGDRIA ALQQLVAPFG KTDTASVLME AIGYIKFLQD QVETLSVPYM  360
KPSRNNTRRS IQEGSMEDVD EEQKRDLRSR GLCLVPLSCM SYITNDNIGG WPSASDFGGR  420
N*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010254734.11e-149PREDICTED: transcription factor bHLH110-like isoform X1
TrEMBLA0A2G5EAI90.0A0A2G5EAI9_AQUCA; Uncharacterized protein
STRINGAquca_010_00556.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.11e-58bHLH family protein