PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G133300.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family MYB_related
Protein Properties Length: 563aa    MW: 63942.9 Da    PI: 4.5744
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G133300.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.46.8e-13510559147
                        TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
    Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                        r++W+  E+e l+davk++G g+Wk+I        + Rt  ++k++w++ 
  Aqcoe6G133300.2.p 510 RKKWSSLEEETLIDAVKEYGRGNWKRILDNYSeifEERTMVDLKDKWRNM 559
                        789********************************9************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.532505562IPR017930Myb domain
SuperFamilySSF466895.89E-14507561IPR009057Homeodomain-like
SMARTSM007171.8E-9509562IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.1E-12509561IPR009057Homeodomain-like
PfamPF002494.4E-10510559IPR001005SANT/Myb domain
CDDcd116601.41E-18511561No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 563 aa     Download sequence    Send to blast
MDENKQKRWT LEFLFRQPID DQLLIQLISA LSLSTVDYRL MKTLLLRRVS SEIKKGLVSE  60
KILEALEQIE EIDCQMGVEI LDSMKEAYCA VVVDYVMNFM KENAKNISEY NNLIGRICKG  120
RLLDLKRAKE VGLVLDWPKH LANELNVELR DVSIDDYMMT KDTRSDALKL VKVYLEEVTE  180
EMGPPFLELA IQTLSENRNE VQNVSNTSIP DDTVGVRQEG FFHDQGDGLD ENIGNDVENN  240
SSKMDADSSV SGDNFPSTKE CHTMLISECR EVNESNDEET CEMDPLFLKL ASKSVNEKVN  300
EIQAPTNTLI DSQIGVRQDC LHDALGENVD NNDGTLSGDR SHKMGINLSV EGPHRTTMTC  360
DPVLTPEFRK VQEALRSSVS DLRDVVNDPL PDALCMAANV VANIAKEGMI NVQSVENQDE  420
VDINRHNHSF DKGREDVRAE NGNIRNQAAV SRPSLMERNP TAHTVEWDSD QIESSSEGSQ  480
NCPHLPTPKG RLITPLKRRA TQDITERRKR KKWSSLEEET LIDAVKEYGR GNWKRILDNY  540
SEIFEERTMV DLKDKWRNMT RY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1496511KRRATQDITERRKRKK
2507511RKRKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5EAU60.0A0A2G5EAU6_AQUCA; Uncharacterized protein
STRINGAquca_010_00618.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15720.12e-14TRF-like 5