PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G137000.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 291aa    MW: 32779.1 Da    PI: 7.8198
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G137000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM88.21.5e-27261621128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWka 85 
                        l pG+rFhPt+++++++yL +k ++ +++    i+e+ d+y+++P dL +       + +++k+wy+F+  ++k   g+  +r+ k+g+Wk 
  Aqcoe6G137000.1.p  26 LSPGYRFHPTEQQILSYYLSNKNKNPTTQS--SIPEInDLYNYDPYDLVEndsfpyGYGGNKKHWYYFTILNRK---GSLVKRKSKAGFWKR 112
                        579*******************99988666..699998**********744677765566888*******9997...5678888889***** PP

                NAM  86 tgkdkevlsk...kgelvglkktLvfy....kgrapkgektdWvmheyrl 128
                        + k ++vl+    +g l g+k+++vfy    + ++++  +t+W+m ey+l
  Aqcoe6G137000.1.p 113 KCKPRNVLCGndkEGILLGTKTSFVFYkrdsSSSSRRCCRTNWIMIEYAL 162
                        ********974445555**********4333244555569********87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-3122178IPR003441NAC domain
PROSITE profilePS5100536.55726178IPR003441NAC domain
PfamPF023651.4E-1728162IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MGDLNTKNPK SPPLPPPPPL QPPLSLSPGY RFHPTEQQIL SYYLSNKNKN PTTQSSIPEI  60
NDLYNYDPYD LVENDSFPYG YGGNKKHWYY FTILNRKGSL VKRKSKAGFW KRKCKPRNVL  120
CGNDKEGILL GTKTSFVFYK RDSSSSSRRC CRTNWIMIEY ALVDHQMDFF VLCRVYLKTC  180
PENKVMKVGL NSHAEESFAV KDSSFAGVPY RQHNGASALG IGEVVVHEDT VRPFSDNGVG  240
SSLDVRQSDK LVIFDENDMD ELRTNAIFLE GDYLELDDLV GPLFGFGSSG *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-192417813168Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DRS50.0A0A2G5DRS5_AQUCA; Uncharacterized protein
STRINGAquca_015_00022.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.13e-21NAC domain containing protein 53