PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G165900.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family MYB_related
Protein Properties Length: 281aa    MW: 32046.8 Da    PI: 7.4
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G165900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.31.3e-1175119347
                        SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        +WT+ E+ l+v + ++ G g Wk+Iar++  ++t  q+ s+ qky
  Aqcoe6G165900.1.p  75 PWTEMEHRLFVWGLEECGRGAWKSIARHFVRTKTSCQVASHAQKY 119
                        8*****************************9*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512937.128132IPR017884SANT domain
Gene3DG3DSA:1.10.10.607.0E-4327IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.2E-868120IPR009057Homeodomain-like
PROSITE profilePS5129412.94268124IPR017930Myb domain
SuperFamilySSF466891.87E-1469124IPR009057Homeodomain-like
SMARTSM007172.5E-672122IPR001005SANT/Myb domain
TIGRFAMsTIGR015571.3E-1373122IPR006447Myb domain, plants
PfamPF002491.4E-874119IPR001005SANT/Myb domain
CDDcd001676.64E-775120No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MDLFETIASQ IPGKTADQVE EHFHSLIPKL DISNHGLVPD RGKTLVSSDE VESSKHPVRG  60
RRPTPNNTAR RHHVPWTEME HRLFVWGLEE CGRGAWKSIA RHFVRTKTSC QVASHAQKYF  120
MRRDNPGSYV GRRYSILDIH TFDQSIRPNT RFAYYKPIAP YPFPPARPIH PPPVDYNIFA  180
GSSRVRNKYL SANLYPTEDY YDFPQNNVTI NPPSGPPPSL YPTEDYYNFP QNGTNNPLFR  240
PPPMNNDNEA GTSMSYPESP SIYLLDEPLP DDNLISANFM *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DSY10.0A0A2G5DSY1_AQUCA; Uncharacterized protein
STRINGAquca_015_00276.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.15e-25MYB family protein