PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe6G166100.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

MYB_related

Protein Properties

Length: 298aa MW: 34535.7 Da PI: 7.7571

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe6G166100.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.4	1e-10	109	153	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+ E+ l++ + k G g Wk+I+r++ ++t+ q+ s+ qky Aqcoe6G166100.1.p 109 PWTEMEHRLFIWGLKYCGRGAWKRISRYFVRTKTPSQVASHAQKY 153 8*******************************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00717	6.8E-4	11	63	IPR001005	SANT/Myb domain
CDD	cd00167	4.80E-5	14	61	No hit	No description
SuperFamily	SSF46689	1.65E-5	14	64	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	5.4E-5	34	64	IPR009057	Homeodomain-like
PROSITE profile	PS51294	12.607	102	158	IPR017930	Myb domain
SuperFamily	SSF46689	1.42E-14	103	158	IPR009057	Homeodomain-like
SMART	SM00717	3.1E-6	106	156	IPR001005	SANT/Myb domain
TIGRFAMs	TIGR01557	9.9E-14	107	156	IPR006447	Myb domain, plants
Gene3D	G3DSA:1.10.10.60	3.7E-6	108	153	IPR009057	Homeodomain-like
Pfam	PF00249	7.1E-8	108	153	IPR001005	SANT/Myb domain
CDD	cd00167	1.14E-6	109	154	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence Send to blast
MEGDYNIPLT PFPEWTEEEK KLFDVLIADA DLSSMDLFES IASQIPGKTA DQVEEHFHSL 60 IPMVEISSHG HVSDRGKSVV SKDEAKFSKR FIRERRPSPN NTARRHHVPW TEMEHRLFIW 120 GLKYCGRGAW KRISRYFVRT KTPSQVASHA QKYFMRRDNP RSYVGRRYSI LDIHTFDQSL 180 RPKPRFAYYK SIVPYPFPPS PTIYLPPVDY NIFAGSSRVR NKYLSASLYP TEDYYNFPQN 240 VTNNPPFVPP PSLYPTENHY NFPQTVTNND NEAGTSMSYP ESPSNYLLDE PLSDDFC*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5DSX5	0.0	A0A2G5DSX5_AQUCA; Uncharacterized protein
STRING	Aquca_015_00278.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	5e-29	MYB family protein

Link Out ? help Back to Top
Phytozome	Aqcoe6G166100.1.p