PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe6G193500.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

NAC

Protein Properties

Length: 287aa MW: 33498.1 Da PI: 6.8865

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe6G193500.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	152.6	1.8e-47	12	138	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 pGfrFhPt+eel+++yLkk v gkk+++ +vi ++iy+++Pw+Lp ++ +e+ewyfF++r++k+ +g r+nr+t++g+Wkatg+d+++ s Aqcoe6G193500.1.p 12 PGFRFHPTEEELLDFYLKKMVFGKKFRF-DVIGFLNIYHHDPWELPGLARMGEREWYFFVPRNRKQGNGGRPNRTTEHGFWKATGSDRHIRS 102 9************************9.99***********8778899*********************************98 PP NAM 95 k..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ glkktLvfykgrap+g+ktdWvm+eyr+ Aqcoe6G193500.1.p 103 LsdPKQVLGLKKTLVFYKGRAPRGTKTDWVMNEYRM 138 7667888*************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	54.219	10	157	IPR003441	NAC domain
SuperFamily	SSF101941	1.44E-56	11	157	IPR003441	NAC domain
Pfam	PF02365	2.0E-24	12	138	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009965	Biological Process	leaf morphogenesis
GO:0010200	Biological Process	response to chitin
GO:0045792	Biological Process	negative regulation of cell size
GO:0048281	Biological Process	inflorescence morphogenesis
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence Send to blast
MDDKTTPELD LPGFRFHPTE EELLDFYLKK MVFGKKFRFD VIGFLNIYHH DPWELPGLAR 60 MGEREWYFFV PRNRKQGNGG RPNRTTEHGF WKATGSDRHI RSLSDPKQVL GLKKTLVFYK 120 GRAPRGTKTD WVMNEYRMPE NCKLPKEDIV LCKIYRKATS LKVLEQRAVV MEEEMKTSKD 180 VSPCSTLENS VVKQQDDFMT WVVPFADDYL FKPKDEGKEK IKEIKEEIKE VTSDDSSATS 240 SATSSLRHDS IFPELQLPQA NMDWTQDTFW TQLHSPWDLW AANVLY*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	2e-47	12	160	19	168	NO APICAL MERISTEM PROTEIN
1ut4_B	2e-47	12	160	19	168	NO APICAL MERISTEM PROTEIN
1ut7_A	2e-47	12	160	19	168	NO APICAL MERISTEM PROTEIN
1ut7_B	2e-47	12	160	19	168	NO APICAL MERISTEM PROTEIN
3swm_A	2e-47	12	160	22	171	NAC domain-containing protein 19
3swm_B	2e-47	12	160	22	171	NAC domain-containing protein 19
3swm_C	2e-47	12	160	22	171	NAC domain-containing protein 19
3swm_D	2e-47	12	160	22	171	NAC domain-containing protein 19
3swp_A	2e-47	12	160	22	171	NAC domain-containing protein 19
3swp_B	2e-47	12	160	22	171	NAC domain-containing protein 19
3swp_C	2e-47	12	160	22	171	NAC domain-containing protein 19
3swp_D	2e-47	12	160	22	171	NAC domain-containing protein 19
4dul_A	2e-47	12	160	19	168	NAC domain-containing protein 19
4dul_B	2e-47	12	160	19	168	NAC domain-containing protein 19
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010266117.1	1e-121	PREDICTED: transcription factor JUNGBRUNNEN 1-like
Swissprot	Q10S65	1e-105	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A2G5DTW3	0.0	A0A2G5DTW3_AQUCA; Uncharacterized protein
STRING	Aquca_015_00469.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	1e-101	NAC domain containing protein 36

Link Out ? help Back to Top
Phytozome	Aqcoe6G193500.1.p

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]