PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe6G245400.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

bHLH

Protein Properties

Length: 342aa MW: 37576.7 Da PI: 5.8892

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe6G245400.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.6	2.5e-09	61	110	1	54
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r++ + rE+ RRdr+N+ f eL l ++ +K++Ka+iL +++ +k+L Aqcoe6G245400.1.p 61 RKVQKADREKLRRDRLNEQFLELGNALDPD----RPKNDKATILADTIQMLKDL 110 5677889******************997....79**************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	12.913	60	110	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	5.29E-8	61	114	No hit	No description
Pfam	PF00010	4.6E-7	61	110	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.1E-12	61	133	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	2.36E-13	61	130	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.3E-6	66	116	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence Send to blast
MDQWKPEGGG FCHPSISIQG DLADVAALTD YCQPQPPSLN GSHPESSQRT EVEVKDPIAA 60 RKVQKADREK LRRDRLNEQF LELGNALDPD RPKNDKATIL ADTIQMLKDL TSQVNRLKAE 120 YATLSEESRE LTQEKNELRE EKASIKSDID NLNVQYQQRL RVMFPWSAMD PAVMMGPPSY 180 PFAMPVPVPT APIPMHPSMQ PFPFFPSQNP GAIPNPCSTF IPYSAPGNPQ MERPCTYYAS 240 PHQQASSRSH TLSKQDHKSK SSDPHKGSHT EGNVGSNDVA TDLELKTPGS TAEQELSSEE 300 RKEKQSQKQT SAAEQSCSSR CSSQGLQDSS SSSVGGPKVN N*

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence Send to blast

MDQWKPEGGG FCHPSISIQG DLADVAALTD YCQPQPPSLN GSHPESSQRT EVEVKDPIAA  60
RKVQKADREK LRRDRLNEQF LELGNALDPD RPKNDKATIL ADTIQMLKDL TSQVNRLKAE  120
YATLSEESRE LTQEKNELRE EKASIKSDID NLNVQYQQRL RVMFPWSAMD PAVMMGPPSY  180
PFAMPVPVPT APIPMHPSMQ PFPFFPSQNP GAIPNPCSTF IPYSAPGNPQ MERPCTYYAS  240
PHQQASSRSH TLSKQDHKSK SSDPHKGSHT EGNVGSNDVA TDLELKTPGS TAEQELSSEE  300
RKEKQSQKQT SAAEQSCSSR CSSQGLQDSS SSSVGGPKVN N*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010261279.1	1e-148	PREDICTED: transcription factor bHLH121
Swissprot	Q9LT23	4e-77	BH121_ARATH; Transcription factor bHLH121
TrEMBL	A0A2G5EN88	1e-172	A0A2G5EN88_AQUCA; Uncharacterized protein
STRING	Aquca_006_00146.1	1e-173	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19860.1	4e-67	bHLH family protein

Link Out ? help Back to Top
Phytozome	Aqcoe6G245400.1.p

Publications ? help Back to Top
Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] Min JH, et al. Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element. Front Plant Sci, 2017. 8: p. 2100 [PMID:29321786]