PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G259000.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 441aa    MW: 48013.5 Da    PI: 6.7535
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G259000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.81.1e-09276324355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Aqcoe6G259000.1.p 276 NSHSLAERVRREKISQRMKYLQDLVPGC----DKITGKALMLDEIINYVQSLQ 324
                        58*************************9....899*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.29E-9271328No hitNo description
SuperFamilySSF474592.88E-16271338IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.116273323IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.1E-16274337IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.8E-7276324IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.3E-8279329IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009637Biological Processresponse to blue light
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    Send to blast
MDESDNSDLG FEKRGRDLQI TPSSGMYMVP EKIGQTTMKS VPLCKSSNGV DLILSSGWDP  60
HVSLSQNSEL KGSNIDSENP VASYPYNVGM LGNHGASINP HILGYALDPS LLELSPKLSS  120
FGSGSFSAMV SSFGLPEYDQ IANASCPDYH RSKEACINKY SKKLDEHGVM FQGDLQVSDE  180
GGSGSSPNEK KRKRTTDYSS HSEFQNGEAG QKKEVSQGSI EVQKDQSGKK RKTEKNSGTN  240
SHGKSTGKQA KDDSQNEQSS KEDYIHVRAR RGQATNSHSL AERVRREKIS QRMKYLQDLV  300
PGCDKITGKA LMLDEIINYV QSLQRQVEFL SMKLSTVNPG LNIDIERIIS KEILHSQVGG  360
SGILGFGSGI SSVLSQPHIS SQGPVQPIHC SDSHVQPGPQ IPSAWDDELQ NIFHMGLMSN  420
PALQSLGLDG KLEQVESRRS *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189194KKRKRT
2222231QKDQSGKKRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00135DAPTransfer from AT1G10120Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010273628.11e-145PREDICTED: transcription factor bHLH74-like isoform X2
TrEMBLA0A2G5EMX40.0A0A2G5EMX4_AQUCA; Uncharacterized protein
STRINGAquca_006_00058.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.13e-60bHLH family protein