PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G285000.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 358aa    MW: 39604.9 Da    PI: 4.7647
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G285000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.73.1e-112753151055
                        HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        r+RR+riN+++  L+ l+P+      +K++ +++Le+AveY+k Lq
  Aqcoe6G285000.1.p 275 RKRRERINERLKILQNLVPNG-----TKVDISTMLEEAVEYVKFLQ 315
                        9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.402265314IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-14265331IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-13270331IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.2E-12271320IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.05E-12274319No hitNo description
PfamPF000101.3E-8275315IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MESVGILSEG EWNSFNGMFS DEADYMSQLI GNCSFQNQHD GGLSLGNTSI FWPTHDSTIN  60
MVMGDNEGSY FCAETINTNT LHFPNGSSYS SDSSLYDPKL GYDNYYLNES IPCTVNDNSS  120
MSMDYSIVRE HTNGLLTKAC PKNLMEEAVC KNEEVTTGCL RESFAQTLVQ DQKLPPNRKY  180
KMTEQDAQDV PRDKKSAQPK KKQKFTSCSK VEEESNCGFN GLSSSSYSSE DDSNGSQELN  240
GGATSCSKKT AALNLNGKAR AGRGSATDPQ SLYARKRRER INERLKILQN LVPNGTKVDI  300
STMLEEAVEY VKFLQLQIKL LSSDEHWMYS PIAYNGMNIG LNLKISPPQQ SVDNNEG*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022762371.11e-101transcription factor bHLH84-like
TrEMBLA0A2G5CQU80.0A0A2G5CQU8_AQUCA; Uncharacterized protein
STRINGAquca_042_00163.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.11e-55bHLH family protein