PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G021100.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 349aa    MW: 38972.4 Da    PI: 4.9225
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G021100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.83.5e-31159217259
                        --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                        +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers++dp +++itY+ eHnh+
  Aqcoe7G021100.1.p 159 SDMWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERSRSDPAMFIITYTAEHNHP 217
                        79*************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.2E-32144219IPR003657WRKY domain
PROSITE profilePS5081134.612153219IPR003657WRKY domain
SuperFamilySSF1182901.57E-26156219IPR003657WRKY domain
SMARTSM007741.0E-37158218IPR003657WRKY domain
PfamPF031066.8E-26160217IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010150Biological Processleaf senescence
GO:0010200Biological Processresponse to chitin
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MEEDWDLQAV VRGCRTSNST TNTTTTTTTV TTATSIMVDN ESFSCFPTLG FQQQENFLCM  60
PDLFESKTVL EELEQLYKPF LPKFELPISP LNSLSNSTSF SAPVFHQQEQ QQVPQIKQEQ  120
QHQQPRRSLS TSTITPRPKR RKNQQKKVVC QVPAEGISSD MWAWRKYGQK PIKGSPYPRG  180
YYRCSSSKGC LARKQVERSR SDPAMFIITY TAEHNHPVPT HRNSLAGSTR HKLTTPQTPT  240
TPTTTTISKL PSTSSPMGLS PTTPLTTSME EEEEDELLLK QSKQEEGEDD DDEFGISRLE  300
ELMSDDLFME LDEMAGADSS GVVPATFDDC FNSSHWFNTN SATAAGGV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-21147220680Disease resistance protein RRS1
5w3x_D1e-21147220680Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00422DAPTransfer from AT4G01250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010261384.11e-101PREDICTED: WRKY transcription factor 22-like
TrEMBLA0A2G5E0670.0A0A2G5E067_AQUCA; Uncharacterized protein
STRINGAquca_013_00193.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.13e-48WRKY family protein