PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G023800.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 188aa    MW: 21111.7 Da    PI: 9.068
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G023800.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY352.9e-11128150123
                        ---SS-EEEEEEE--TT-SS-EE CS
               WRKY   1 ldDgynWrKYGqKevkgsefprs 23 
                        ldDgy+WrKYGqK+vk+s +pr+
  Aqcoe7G023800.2.p 128 LDDGYRWRKYGQKSVKNSLHPRK 150
                        59*******************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.0E-12115150IPR003657WRKY domain
SuperFamilySSF1182903.79E-9121150IPR003657WRKY domain
PROSITE profilePS5081112.438123149IPR003657WRKY domain
SMARTSM007741.6E-4128173IPR003657WRKY domain
PfamPF031069.8E-8129150IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MEGRGHNIPP SNPSYIFTPS TLALPSLPPS LLHLQQHQPC QQPQQEPHDE MVGDIDWVSL  60
FSAPNINMLD SNQQLSASTS SVTVGSRGDG EINNDGIGKD KGKSSRSRTK KVCRPRFAFQ  120
TRSADDILDD GYRWRKYGQK SVKNSLHPRK LILWDFFISG NSYYGIFFIF HAPPESQTNI  180
EYKRMNG*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00539DAPTransfer from AT5G41570Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012083303.11e-30probable WRKY transcription factor 43
TrEMBLA0A2G5E0D41e-106A0A2G5E0D4_AQUCA; Uncharacterized protein
STRINGAquca_013_00218.11e-107(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41570.15e-18WRKY DNA-binding protein 24