PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G033600.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 305aa    MW: 35370.2 Da    PI: 5.4639
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G033600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM661.1e-20171451128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv...ePwdLpkkvkaeekewyfFskrdkkya..tgkrknratksgyWkatg 87 
                        +ppGf+F Ptd+el+++yL+kk++g++   + vi +  +y     ePw++ +  ++ ++ +yf++  +kk++  +++   r   +g Wk   
  Aqcoe7G033600.1.p  17 VPPGFQFCPTDHELLSYYLTKKLRGDEDLPKGVIVDRTLYGKeapEPWKIFEGRTKVDEVIYFYTWVNKKHSgsNSNYYDRFCGEGKWKI-D 107
                        69***********************995555889998888654458****6332333456699998888876435667788899****95.5 PP

                NAM  88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        k+ e+++++++l g kk + f    a k +  +W+m+e++l
  Aqcoe7G033600.1.p 108 KTYEIFDSQNRLLGFKKKFNFD---ADKNKYGSWIMEEFTL 145
                        77999999*************8...4444568*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.96E-2414161IPR003441NAC domain
PROSITE profilePS5100526.0617164IPR003441NAC domain
PfamPF023652.7E-1418145IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MCMDIVREQE EEAVLVVPPG FQFCPTDHEL LSYYLTKKLR GDEDLPKGVI VDRTLYGKEA  60
PEPWKIFEGR TKVDEVIYFY TWVNKKHSGS NSNYYDRFCG EGKWKIDKTY EIFDSQNRLL  120
GFKKKFNFDA DKNKYGSWIM EEFTLNTPNP NNKQELAVCM MHRGRIIKKS EDKYDNDQFM  180
NNMPCSKKRT RIVNESEPPR STKMLKQTME SVPAASTPQP PLIIDEQPML APYGGLIFPT  240
FEGTAVELTF GMDLTQQDHH GNCLWMSHQE SQPQPPTQPC IIDSYDSLLQ QEWAPTSWPP  300
AILKN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A9e-1531451140Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5E0X00.0A0A2G5E0X0_AQUCA; Uncharacterized protein
STRINGAquca_013_00314.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.25e-13NAC domain containing protein 38