PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G047600.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 298aa    MW: 32496.8 Da    PI: 7.0268
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G047600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-193686256
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                       ++ GVr ++ +grWvAeI+d s   ++ r +lg+f+taeeAa+a+++a+++l+ge
  Aqcoe7G047600.1.p 36 RFVGVRKRP-SGRWVAEIKDSS---QHVRLWLGTFDTAEEAARAYDEAARALRGE 86
                       589******.7*********42...35**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.4E-283693IPR001471AP2/ERF domain
PROSITE profilePS5103220.8113693IPR001471AP2/ERF domain
CDDcd000182.26E-323693No hitNo description
SMARTSM003804.9E-363699IPR001471AP2/ERF domain
PfamPF008472.2E-143686IPR001471AP2/ERF domain
PRINTSPR003676.5E-83748IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-203793IPR016177DNA-binding domain
PRINTSPR003676.5E-85975IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MADSNATNNT PTAATSSATT TTTNSTHSSN KSIIRRFVGV RKRPSGRWVA EIKDSSQHVR  60
LWLGTFDTAE EAARAYDEAA RALRGENART NFAPMSPSPT LSDSSPLMSP ESQDGRHGLN  120
FSSLKAKLSK NLQSIIARTK DNKSAKSRVS DHFTFASIFH RNHHQYQSPV DMKNIEKAVQ  180
PSIIVPSHMA DELSSWDSSI RSDSSTTGSS DCTGFRQNGI DSDGSDIGEV FVSEQGFMGW  240
MDSPETNELG MLADDDELSR SKRFKVSSSI MVPPTFSASP LAETSHRNCL TKSFSFE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-1736921471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022759534.11e-116ethylene-responsive transcription factor ESR2-like
TrEMBLA0A2G5E2770.0A0A2G5E277_AQUCA; Uncharacterized protein
STRINGAquca_013_00424.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-16related to AP2 11