PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe7G055500.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

Trihelix

Protein Properties

Length: 921aa MW: 104034 Da PI: 7.3957

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe7G055500.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	25.3	4e-08	170	230	20	81
trihelix 20 rlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 ++gk ++ + +ev++++ +g++r +k+ kw+n+ ++++k+ e+ek+++ e++ +y Aqcoe7G055500.1.p 170 MPSKGKTRAEKDREVAEFLNLHGVNRDAKTAGTKWDNMLGEFRKVYEWEKGNEREQV-GKSY 230 456788999999**************************************9855544.3445 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF56112	1.78E-14	750	910	IPR011009	Protein kinase-like domain
CDD	cd00180	3.43E-9	774	906	No hit	No description
Gene3D	G3DSA:1.10.510.10	2.7E-5	776	904	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 921 aa Download sequence Send to blast
MGDKGGGDGI KKQQQQHSTS PKTQHDKPTD QPLQQQQQVK RPRYESTQWK LLPSQPAQQQ 60 QQQQRHSQMA IITSTESTPS PTNNPQPQLT QPTTHSSSSP TPSSPSGQET NKSAERLQSQ 120 THSQFRKGKY VSPVWKPIEM LWLAKAWRVQ YQGGGADVDT SSTNSDLLTM PSKGKTRAEK 180 DREVAEFLNL HGVNRDAKTA GTKWDNMLGE FRKVYEWEKG NEREQVGKSY FRLSPYERKN 240 HRLPASFDEE VYNELSQFMG FRLRTPQTRG ISSSALITTA TKSLPTPPSI KEDETSLSAG 300 RVKQVVTYSG NEGFSHGISR GNLFSGFDSS AEVLIAPSSS SSTRDALRRI GRIRMTWEES 360 ISLWAEEGEY HRGRVKLEGL SFLNADEVTF LDETMVGCTM EAFEDGPLKG FSIDKFTYGQ 420 QVKVFGRRKS TSTSSGFRER IQLPFTEPSI KSIPPWEYQD PTEYYMGCLR VSPTTLPSLI 480 ELTWHLQEPP PEDSRFPLRK DVYRDLPQGK ELFFTTSNEL LDCRAITFDI LSPIVRSNSS 540 ISSSSRDSFI GLWDDCINRV VAKFCSQEMV FIRKPSSPSE IGTLQDQWPN VTGFVRNLCL 600 WRGEEIDQTR EGNLDPSFSI AEKVLWTYMD LPYILGYYAI GYLVTFCALS RSQDRVVRTD 660 LYTVDLSTPT GRLKALVPCW RIAGLLPLLA ERLSNYNKNN NLVPYSDFEV LDLGGGNRIE 720 FTPNVTTRIF SSKRKWTAIK EIYDFLDDRI PHVENIFEAS EKELSLVFKP RGFNSKPTTC 780 EELVEALKFV TKALVALHDV SFMHRDLGWD KVMKRCDREN EWFVTGFDEA VGAPQIYPHG 840 EMVGSRHAPE MGRGLHGVKV DVWGVGQLLK TCGLVGVPKM LRELQNMCLD QNPELRPTAA 900 DCYHHLLQLQ SSLSAASGGY *

Sequence ? help Back to Top

Protein Sequence Length: 921 aa Download sequence Send to blast

MGDKGGGDGI KKQQQQHSTS PKTQHDKPTD QPLQQQQQVK RPRYESTQWK LLPSQPAQQQ  60
QQQQRHSQMA IITSTESTPS PTNNPQPQLT QPTTHSSSSP TPSSPSGQET NKSAERLQSQ  120
THSQFRKGKY VSPVWKPIEM LWLAKAWRVQ YQGGGADVDT SSTNSDLLTM PSKGKTRAEK  180
DREVAEFLNL HGVNRDAKTA GTKWDNMLGE FRKVYEWEKG NEREQVGKSY FRLSPYERKN  240
HRLPASFDEE VYNELSQFMG FRLRTPQTRG ISSSALITTA TKSLPTPPSI KEDETSLSAG  300
RVKQVVTYSG NEGFSHGISR GNLFSGFDSS AEVLIAPSSS SSTRDALRRI GRIRMTWEES  360
ISLWAEEGEY HRGRVKLEGL SFLNADEVTF LDETMVGCTM EAFEDGPLKG FSIDKFTYGQ  420
QVKVFGRRKS TSTSSGFRER IQLPFTEPSI KSIPPWEYQD PTEYYMGCLR VSPTTLPSLI  480
ELTWHLQEPP PEDSRFPLRK DVYRDLPQGK ELFFTTSNEL LDCRAITFDI LSPIVRSNSS  540
ISSSSRDSFI GLWDDCINRV VAKFCSQEMV FIRKPSSPSE IGTLQDQWPN VTGFVRNLCL  600
WRGEEIDQTR EGNLDPSFSI AEKVLWTYMD LPYILGYYAI GYLVTFCALS RSQDRVVRTD  660
LYTVDLSTPT GRLKALVPCW RIAGLLPLLA ERLSNYNKNN NLVPYSDFEV LDLGGGNRIE  720
FTPNVTTRIF SSKRKWTAIK EIYDFLDDRI PHVENIFEAS EKELSLVFKP RGFNSKPTTC  780
EELVEALKFV TKALVALHDV SFMHRDLGWD KVMKRCDREN EWFVTGFDEA VGAPQIYPHG  840
EMVGSRHAPE MGRGLHGVKV DVWGVGQLLK TCGLVGVPKM LRELQNMCLD QNPELRPTAA  900
DCYHHLLQLQ SSLSAASGGY *

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010272624.1	0.0	PREDICTED: uncharacterized protein LOC104608361
TrEMBL	A0A2G5E262	0.0	A0A2G5E262_AQUCA; Uncharacterized protein
STRING	Aquca_013_00493.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	2e-07	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Aqcoe7G055500.1.p