PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe7G055800.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

bHLH

Protein Properties

Length: 238aa MW: 27043.8 Da PI: 5.0363

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe7G055800.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.8	2e-13	65	117	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ ah e Er+RR+++Ns + Lr+llP ++K s ++ +A++YIk+L+ Aqcoe7G055800.1.p 65 KKIAHRELERQRRQEMNSLYTSLRSLLPLeY---VKGKRSISDHMYEATNYIKDLE 117 6889***********************77...9****************996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	4.58E-15	62	132	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.23E-11	62	121	No hit	No description
PROSITE profile	PS50888	14.361	64	116	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.4E-10	65	117	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	9.9E-13	66	131	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.6E-5	70	122	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence Send to blast
MNNYIYPLYP LQQGDDELLE QIFSTQPIIQ QDMLHEKNLP NSQPCDPPIK SQDTKSLSEA 60 TDSTKKIAHR ELERQRRQEM NSLYTSLRSL LPLEYVKGKR SISDHMYEAT NYIKDLEKNI 120 HELKDKRDKL KIVTNFGTTE ITMTESISGS DFATVRKCWQ GVEVVVSSSL KEVVVSLSRV 180 LEVLLEEGLT AVNCVSSKVD ERLIHTIQAE VMDPAASINT SDLQQRLMSL VQQVEFP*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021593215.1	2e-58	transcription factor bHLH36-like
Swissprot	Q9FLI1	6e-44	BH036_ARATH; Transcription factor bHLH36
TrEMBL	A0A2G5E1Z3	1e-174	A0A2G5E1Z3_AQUCA; Uncharacterized protein
STRING	Aquca_013_00494.1	1e-175	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51780.1	1e-38	bHLH family protein

Link Out ? help Back to Top
Phytozome	Aqcoe7G055800.1.p