PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G108000.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 226aa    MW: 25026.5 Da    PI: 4.8857
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G108000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.9e-183482355
                AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       +kGVr +k +g+Wv+eIr p++   r r++lg+++t+e+Aa+a +aa  +l+g
  Aqcoe7G108000.1.p 34 FKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDTPEKAARAFDAALYCLRG 82
                       8****999.**********933...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103221.7863390IPR001471AP2/ERF domain
CDDcd000188.80E-283390No hitNo description
PfamPF008477.5E-113382IPR001471AP2/ERF domain
SMARTSM003801.3E-313396IPR001471AP2/ERF domain
SuperFamilySSF541714.71E-203491IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.107.0E-293491IPR001471AP2/ERF domain
PRINTSPR003674.6E-93445IPR001471AP2/ERF domain
PRINTSPR003674.6E-95672IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MVKTTQPTTT TTTTTTPTSD DAKQKRINDD NIRFKGVRKR KWGKWVSEIR LPNSRERIWL  60
GSYDTPEKAA RAFDAALYCL RGKQAKFNFP QNPPDIQGGT SLKPHEIQVA AANFANQIPS  120
SSSLSQQIDS HNHHFNDFVV PSSPPQSNSD SGGVQTGSDL SVMDWPLLDF SMMTGSESST  180
PDFGKFGGLD DFAENYLAPE LNFDNYDEQE INGGDCSQSS FLWNF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-152791873Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13440KGVRKRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00151DAPTransfer from AT1G19210Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010261769.14e-64PREDICTED: ethylene-responsive transcription factor ERF017-like
TrEMBLA0A2G5C8H51e-167A0A2G5C8H5_AQUCA; Uncharacterized protein
STRINGAquca_076_00039.11e-168(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-49ERF family protein