PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G121400.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family B3
Protein Properties Length: 313aa    MW: 36019.1 Da    PI: 5.8047
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G121400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.33.8e-1591182198
                        EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                        f+ +++ s+v+   +l +p  f + + ++   s+++t+++++g+ W++++     sg++++t+GWk F+ +n L+ gD + F+l+++ ++ +
  Aqcoe7G121400.1.p  91 FVAEMKDSNVGYPFQLNVPIAFSRLN-LP-CFSTDITIQNLKGNIWKIRF--YCDSGMHMFTNGWKVFALDNALRKGDHCEFELVDE-CK-M 176
                        66778889999999999999998666.44.47889***************..99999**************************9874.33.5 PP

                        EEEEE- CS
                 B3  93 vvkvfr 98 
                        + ++fr
  Aqcoe7G121400.1.p 177 LCQIFR 182
                        777776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.103.6E-2085182IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.75E-2288183IPR015300DNA-binding pseudobarrel domain
CDDcd100175.24E-1889182No hitNo description
SMARTSM010193.7E-1191184IPR003340B3 DNA binding domain
PROSITE profilePS5086313.32491184IPR003340B3 DNA binding domain
PfamPF023621.2E-1391182IPR003340B3 DNA binding domain
SMARTSM004541.8E-7245310IPR001660Sterile alpha motif domain
Gene3DG3DSA:1.10.150.501.1E-13249304IPR013761Sterile alpha motif/pointed domain
PfamPF005361.4E-13250305IPR001660Sterile alpha motif domain
SuperFamilySSF477692.44E-12250305IPR013761Sterile alpha motif/pointed domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MKQQVEFLSK FQYHGMDFEY EKKPRRTVKE EGKLPGTNGM YFKHFTAVEK KNKKPQIFTA  60
KAEMEDIVEV IDLEEDEEDV TMEADQVYPK FVAEMKDSNV GYPFQLNVPI AFSRLNLPCF  120
STDITIQNLK GNIWKIRFYC DSGMHMFTNG WKVFALDNAL RKGDHCEFEL VDECKMLCQI  180
FRVDRPKRSL EDSENTSTTR GWTIYEESTT KRDLSPKNKN KKARTLAPEV TDTSSCVDKL  240
KSTRHVSDQV DSVDSFLESM GLEKYLSTFK AEEIDMTALK FMDEDDFKSL CIPMGPRKKI  300
LAALDSKAKA LS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5F8990.0A0A2G5F899_AQUCA; Uncharacterized protein
STRINGAquca_001_00015.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60142.13e-07B3 family protein