PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G134900.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family Dof
Protein Properties Length: 220aa    MW: 24192.6 Da    PI: 8.3847
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G134900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.85.6e-391676262
             zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                       ++++lkcprCds+ntkfCyynny+lsqPr++Ck+CrryWtkGGalrn+P+Ggg+rk  k+s
  Aqcoe7G134900.1.p 16 EQEHLKCPRCDSSNTKFCYYNNYNLSQPRHYCKNCRRYWTKGGALRNIPIGGGTRKAAKRS 76
                       57899***************************************************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074783.0E-281172IPR003851Zinc finger, Dof-type
PfamPF027016.7E-331874IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.8452074IPR003851Zinc finger, Dof-type
PROSITE patternPS0136102258IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MQDPSTFLPI KPNFPEQEHL KCPRCDSSNT KFCYYNNYNL SQPRHYCKNC RRYWTKGGAL  60
RNIPIGGGTR KAAKRSSSNP KRPSSSSSSS SSTTSSAQKV VPKPESTGIF SQAIVPVEQD  120
RQLLDITGSF SSLLTSNDHF PLLEGLNHSN GPIPRTFQFG DFTEHSNSSS IENPTLELQT  180
SHNNHDHTFL SIQAGDSSCW TNSNGWPDLA IHTPGSGFQ*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00199DAPTransfer from AT1G51700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010262218.13e-94PREDICTED: dof zinc finger protein DOF3.1
SwissprotO821552e-41DOF17_ARATH; Dof zinc finger protein DOF1.7
TrEMBLA0A2G5F8V91e-161A0A2G5F8V9_AQUCA; Uncharacterized protein
STRINGAquca_001_00128.11e-161(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.14e-39DOF zinc finger protein 1
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]