PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G147500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 374aa    MW: 42170.7 Da    PI: 4.4207
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G147500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.32e-06188228853
                        HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
                HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                         Er+RR+r+ + +  Lr l+P+      +K++K ++L  A  Y+++
  Aqcoe7G147500.1.p 188 SERNRRKRLSKQLLSLRALVPNI-----TKMDKRSVLVDALSYLRK 228
                        6*********************7.....6**************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.411180229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.25E-6183234No hitNo description
SuperFamilySSF474593.79E-12184247IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.9E-6186235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.3E-9186243IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MGTQLDACLP PQEPKTTQQD LIISSWFDLD DEFLQQELQD LENHLFDLET DPVSFSSLPI  60
QEGSPFMLDL YNDDINAPQA GVLQPRPNDQ PILPVQQCVE PDVRDTFLNG SEFGLISPTD  120
LSPDINNNIN DNQFCETMIS GLMNPLGNVE ISEPMITMTN ATDEDGTDDD EDRANCKQGT  180
LNSKNMVSER NRRKRLSKQL LSLRALVPNI TKMDKRSVLV DALSYLRKIH EEIELLQKEI  240
KEHQTGPKLN DFRETSQDAP FGTLGIPHTA SASVTYRIPK AHITEIDIEK IEDKRFIVKI  300
TCEGGVGVRS DVLRVFESLD FEITYAALQQ LQPQVFLVTI FVRVKKQWKM TEQKLKYSIT  360
SMASRTGLTL SNP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5F9M30.0A0A2G5F9M3_AQUCA; Uncharacterized protein
STRINGAquca_001_00269.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.23e-07bHLH family protein