PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G154500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 350aa    MW: 39689.4 Da    PI: 4.241
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G154500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.92.8e-06185225853
                        HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
                HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                         Er+RR+r+ + +  Lr l+P+      +K +K ++L  A  Y+++
  Aqcoe7G154500.1.p 185 SERNRRKRLTKQLLSLRALVPHI-----TKIDKRSVLVDALSYLRN 225
                        6*********************7.....6**************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.382177226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.49E-5180231No hitNo description
SuperFamilySSF474594.84E-11181244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.3E-4183232IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-8183240IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MGTQVDALPF QEPRTQQDII SSWLDLDDAY TPIFQQELQN LENHLFNFET NPVTSLPIPE  60
ESPFMLDLYN FNTELLDPND QNYQLMVPVE QCVQPEVCDI FLNDYEFGLT SPTDLSPESN  120
NINDQFCETT ETGLMNPSGD VEMSEPMVTT ANATESNKST DEDYDDGTNE DPPKPGTLNS  180
KNMVSERNRR KRLTKQLLSL RALVPHITKI DKRSVLVDAL SYLRNIHEET ERLQKELKEQ  240
QPGLKLSDLR ESSQDNPSGT FRIPRITSAS VAYPKSKVQI TEIDVEKIEH KRFIVKVTCK  300
GCAGVGNDVL RVFESLDFEI TYTALQQLQP QEVLVTIFVR VSTFTTNLN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5FA010.0A0A2G5FA01_AQUCA; Uncharacterized protein
STRINGAquca_001_00352.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.26e-23bHLH family protein