PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe7G155200.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

bHLH

Protein Properties

Length: 233aa MW: 26106.7 Da PI: 10.0319

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe7G155200.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.4	8.4e-11	29	75	2	51
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51 r+ h+ +Er RR+ +++ f L +llP+a + + + ++iLe+ ++YI Aqcoe7G155200.1.p 29 RERHKLAERERRKSMRELFLSLHSLLPQA---STVRKEQSSILEEIIKYI 75 899************************...9999***********9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	1.96E-11	20	92	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	12.055	27	78	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	2.1E-9	29	92	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.36E-7	29	75	No hit	No description
Pfam	PF00010	4.1E-8	29	75	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	0.0066	33	91	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence Send to blast
MSVEGNKDWE TVSSEGKSWR SSGTPNNARE RHKLAERERR KSMRELFLSL HSLLPQASTV 60 RKEQSSILEE IIKYIPIAAA RLRSLQNRKD SVPLNISNKT LSPAIQVFNK KSLDSLNSSD 120 CDIRVAPEPS LSVDIRVRGD QVNVSLTDNK GTSQALLLSS AILDELEAHN LELVRSTHCR 180 DGSKVLHHSE CKISDGLERS PALLKTRLQE LACKLHKLRK SSTFKRTFDQ LD*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010246746.1	1e-100	PREDICTED: uncharacterized protein LOC104589957
TrEMBL	A0A2G5ED53	1e-134	A0A2G5ED53_AQUCA; Uncharacterized protein
STRING	Aquca_009_00234.1	1e-135	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49770.1	2e-06	bHLH family protein

Link Out ? help Back to Top
Phytozome	Aqcoe7G155200.1.p