PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G156100.3.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 216aa    MW: 24378.9 Da    PI: 3.8844
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G156100.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.70.00011188209829
                        HHHHHHHHHHHHHHHHHCTSCC CS
                HLH   8 rErrRRdriNsafeeLrellPk 29 
                         Er+RR+r+ + +  Lr l+P+
  Aqcoe7G156100.3.p 188 SERNRRKRLSKQLLSLRALVPN 209
                        6********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474599.45E-5182211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MEAQLDTFPF EEPRSPQADI ISSWLDLDDV FFQQELQHSE NHLVNLETDP IFSSLPIPEG  60
SPFMLDTCNF NAEQAGLGSN DGHYQPIFLP AQQCVELDVH DTFLNDYDEF GLISPTDLSP  120
DNNNINDEFC ETTMSGIMNI LDDVEMSEPM VTTVSATESN KIDDDDFNKD DMDDRPKPGT  180
LNSKNMVSER NRRKRLSKQL LSLRALVPNI TKVWS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5F9N91e-153A0A2G5F9N9_AQUCA; Uncharacterized protein
STRINGAquca_001_00291.11e-154(Aquilegia coerulea)